RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
NEDD8-206ENST00000531430 H7BZZ5 65 aa3.27□□□□□ -1.89
NEDD8-206ENST00000531430 SVIPQ8NHG7 77 aa3.27□□□□□ -1.89
NEDD8-206ENST00000531430 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
NEDD8-206ENST00000531430 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
NEDD8-206ENST00000531430 MT1LQ93083 61 aa3.24□□□□□ -1.89
NEDD8-206ENST00000531430 SERP1Q9Y6X1 66 aa3.24□□□□□ -1.89
NEDD8-206ENST00000531430 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
NEDD8-206ENST00000531430 SNURFQ9Y675 71 aa3.18□□□□□ -1.9
NEDD8-206ENST00000531430 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
NEDD8-206ENST00000531430 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
NEDD8-206ENST00000531430 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
NEDD8-206ENST00000531430 SEC61GP60059 68 aa3.14□□□□□ -1.91
NEDD8-206ENST00000531430 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
NEDD8-206ENST00000531430 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
NEDD8-206ENST00000531430 V9GYY9 64 aa3.1□□□□□ -1.91
NEDD8-206ENST00000531430 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
NEDD8-206ENST00000531430 Q1T7F1 81 aa3.09□□□□□ -1.91
NEDD8-206ENST00000531430 A0A1B0GU33 70 aa3.08□□□□□ -1.92
NEDD8-206ENST00000531430 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
NEDD8-206ENST00000531430 TNP1P09430 55 aa3.06□□□□□ -1.92
NEDD8-206ENST00000531430 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
NEDD8-206ENST00000531430 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
NEDD8-206ENST00000531430 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
NEDD8-206ENST00000531430 COA5Q86WW8 74 aa3.02□□□□□ -1.93
NEDD8-206ENST00000531430 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
NEDD8-206ENST00000531430 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
NEDD8-206ENST00000531430 A8MU10 97 aa2.98□□□□□ -1.93
NEDD8-206ENST00000531430 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
NEDD8-206ENST00000531430 LINC01558Q9Y6Z2 57 aa2.96□□□□□ -1.94
NEDD8-206ENST00000531430 A0A1B0GU69 56 aa2.91□□□□□ -1.94
NEDD8-206ENST00000531430 PSPHP1O15172 72 aa2.91□□□□□ -1.94
NEDD8-206ENST00000531430 PRR15LQ9BU68 103 aa2.91□□□□□ -1.94
NEDD8-206ENST00000531430 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
NEDD8-206ENST00000531430 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
NEDD8-206ENST00000531430 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
NEDD8-206ENST00000531430 A6NED7 52 aa2.87□□□□□ -1.95
NEDD8-206ENST00000531430 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
NEDD8-206ENST00000531430 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
NEDD8-206ENST00000531430 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
NEDD8-206ENST00000531430 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
NEDD8-206ENST00000531430 UQCR11O14957 56 aa2.81□□□□□ -1.96
NEDD8-206ENST00000531430 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
NEDD8-206ENST00000531430 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
NEDD8-206ENST00000531430 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
NEDD8-206ENST00000531430 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
NEDD8-206ENST00000531430 MT1AP04731 61 aa2.74□□□□□ -1.97
NEDD8-206ENST00000531430 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
NEDD8-206ENST00000531430 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
NEDD8-206ENST00000531430 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
NEDD8-206ENST00000531430 KRTAP15-1Q3LI76 137 aa2.71□□□□□ -1.98
NEDD8-206ENST00000531430 K7ERS5 55 aa2.64□□□□□ -1.99
NEDD8-206ENST00000531430 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
NEDD8-206ENST00000531430 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
NEDD8-206ENST00000531430 MT3P25713 68 aa2.55□□□□□ -2
NEDD8-206ENST00000531430 PRAC1Q96KF2 57 aa2.55□□□□□ -2
NEDD8-206ENST00000531430 KRTAP23-1A1A580 65 aa2.54□□□□□ -2
NEDD8-206ENST00000531430 ROMO1P60602 79 aa2.54□□□□□ -2
NEDD8-206ENST00000531430 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
NEDD8-206ENST00000531430 H3BS24 57 aa2.49□□□□□ -2.01
NEDD8-206ENST00000531430 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
NEDD8-206ENST00000531430 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NEDD8-206ENST00000531430 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
NEDD8-206ENST00000531430 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
NEDD8-206ENST00000531430 NDUFAF8A1L188 74 aa2.14□□□□□ -2.07
NEDD8-206ENST00000531430 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
NEDD8-206ENST00000531430 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
NEDD8-206ENST00000531430 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
NEDD8-206ENST00000531430 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
NEDD8-206ENST00000531430 A0A0A0MQY5 61 aa2□□□□□ -2.09
NEDD8-206ENST00000531430 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
NEDD8-206ENST00000531430 INE1O15225 51 aa1.89□□□□□ -2.11
NEDD8-206ENST00000531430 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
NEDD8-206ENST00000531430 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
NEDD8-206ENST00000531430 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
NEDD8-206ENST00000531430 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
NEDD8-206ENST00000531430 PRM1P04553 51 aa1.31□□□□□ -2.2
NEDD8-206ENST00000531430 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms