RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
TM9SF1-211ENST00000531406 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
TM9SF1-211ENST00000531406 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
TM9SF1-211ENST00000531406 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
TM9SF1-211ENST00000531406 GPR98Q8WXG9 6306 aa4.96□□□□□ -1.61
TM9SF1-211ENST00000531406 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
TM9SF1-211ENST00000531406 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
TM9SF1-211ENST00000531406 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
TM9SF1-211ENST00000531406 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
TM9SF1-211ENST00000531406 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
TM9SF1-211ENST00000531406 ROMO1P60602 79 aa4.81□□□□□ -1.64
TM9SF1-211ENST00000531406 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
TM9SF1-211ENST00000531406 MT1EP04732 61 aa4.79□□□□□ -1.64
TM9SF1-211ENST00000531406 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
TM9SF1-211ENST00000531406 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
TM9SF1-211ENST00000531406 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
TM9SF1-211ENST00000531406 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
TM9SF1-211ENST00000531406 TNP1P09430 55 aa4.77□□□□□ -1.65
TM9SF1-211ENST00000531406 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
TM9SF1-211ENST00000531406 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
TM9SF1-211ENST00000531406 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
TM9SF1-211ENST00000531406 MT1GP13640 62 aa4.65□□□□□ -1.67
TM9SF1-211ENST00000531406 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
TM9SF1-211ENST00000531406 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
TM9SF1-211ENST00000531406 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
TM9SF1-211ENST00000531406 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
TM9SF1-211ENST00000531406 MT4P47944 62 aa4.57□□□□□ -1.68
TM9SF1-211ENST00000531406 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
TM9SF1-211ENST00000531406 MT1MQ8N339 61 aa4.57□□□□□ -1.68
TM9SF1-211ENST00000531406 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
TM9SF1-211ENST00000531406 MT1LQ93083 61 aa4.54□□□□□ -1.68
TM9SF1-211ENST00000531406 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
TM9SF1-211ENST00000531406 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
TM9SF1-211ENST00000531406 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
TM9SF1-211ENST00000531406 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
TM9SF1-211ENST00000531406 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
TM9SF1-211ENST00000531406 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
TM9SF1-211ENST00000531406 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
TM9SF1-211ENST00000531406 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
TM9SF1-211ENST00000531406 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
TM9SF1-211ENST00000531406 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
TM9SF1-211ENST00000531406 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
TM9SF1-211ENST00000531406 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
TM9SF1-211ENST00000531406 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TM9SF1-211ENST00000531406 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
TM9SF1-211ENST00000531406 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
TM9SF1-211ENST00000531406 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
TM9SF1-211ENST00000531406 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
TM9SF1-211ENST00000531406 MT3P25713 68 aa4.04□□□□□ -1.76
TM9SF1-211ENST00000531406 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
TM9SF1-211ENST00000531406 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
TM9SF1-211ENST00000531406 MT1AP04731 61 aa3.85□□□□□ -1.79
TM9SF1-211ENST00000531406 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
TM9SF1-211ENST00000531406 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
TM9SF1-211ENST00000531406 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
TM9SF1-211ENST00000531406 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
TM9SF1-211ENST00000531406 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
TM9SF1-211ENST00000531406 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
TM9SF1-211ENST00000531406 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
TM9SF1-211ENST00000531406 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
TM9SF1-211ENST00000531406 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
TM9SF1-211ENST00000531406 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
TM9SF1-211ENST00000531406 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
TM9SF1-211ENST00000531406 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
TM9SF1-211ENST00000531406 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
TM9SF1-211ENST00000531406 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
TM9SF1-211ENST00000531406 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
TM9SF1-211ENST00000531406 INE1O15225 51 aa3.02□□□□□ -1.93
TM9SF1-211ENST00000531406 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
TM9SF1-211ENST00000531406 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
TM9SF1-211ENST00000531406 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
TM9SF1-211ENST00000531406 PHGR1C9JFL3 82 aa2.58□□□□□ -2
TM9SF1-211ENST00000531406 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
TM9SF1-211ENST00000531406 PRM1P04553 51 aa2.48□□□□□ -2.01
TM9SF1-211ENST00000531406 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
TM9SF1-211ENST00000531406 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TM9SF1-211ENST00000531406 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
TM9SF1-211ENST00000531406 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 88.3 ms