RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
UBXN1-211ENST00000531056 TNP1P09430 55 aa6.98□□□□□ -1.29
UBXN1-211ENST00000531056 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
UBXN1-211ENST00000531056 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
UBXN1-211ENST00000531056 MT1GP13640 62 aa6.83□□□□□ -1.32
UBXN1-211ENST00000531056 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
UBXN1-211ENST00000531056 MT1LQ93083 61 aa6.78□□□□□ -1.32
UBXN1-211ENST00000531056 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
UBXN1-211ENST00000531056 MT1MQ8N339 61 aa6.73□□□□□ -1.33
UBXN1-211ENST00000531056 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
UBXN1-211ENST00000531056 ROMO1P60602 79 aa6.71□□□□□ -1.34
UBXN1-211ENST00000531056 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
UBXN1-211ENST00000531056 H3BS24 57 aa6.58□□□□□ -1.36
UBXN1-211ENST00000531056 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
UBXN1-211ENST00000531056 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
UBXN1-211ENST00000531056 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
UBXN1-211ENST00000531056 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
UBXN1-211ENST00000531056 LCE4AQ5TA78 99 aa6.46□□□□□ -1.38
UBXN1-211ENST00000531056 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
UBXN1-211ENST00000531056 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
UBXN1-211ENST00000531056 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
UBXN1-211ENST00000531056 MT4P47944 62 aa6.36□□□□□ -1.39
UBXN1-211ENST00000531056 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
UBXN1-211ENST00000531056 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
UBXN1-211ENST00000531056 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
UBXN1-211ENST00000531056 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
UBXN1-211ENST00000531056 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
UBXN1-211ENST00000531056 KRTAP4-6Q9BYQ5 205 aa6.21□□□□□ -1.42
UBXN1-211ENST00000531056 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
UBXN1-211ENST00000531056 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
UBXN1-211ENST00000531056 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
UBXN1-211ENST00000531056 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
UBXN1-211ENST00000531056 KRTAP20-2Q3LI61 65 aa6.01□□□□□ -1.45
UBXN1-211ENST00000531056 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
UBXN1-211ENST00000531056 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
UBXN1-211ENST00000531056 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
UBXN1-211ENST00000531056 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
UBXN1-211ENST00000531056 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
UBXN1-211ENST00000531056 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
UBXN1-211ENST00000531056 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
UBXN1-211ENST00000531056 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
UBXN1-211ENST00000531056 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
UBXN1-211ENST00000531056 MT1AP04731 61 aa5.77□□□□□ -1.49
UBXN1-211ENST00000531056 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
UBXN1-211ENST00000531056 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
UBXN1-211ENST00000531056 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
UBXN1-211ENST00000531056 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
UBXN1-211ENST00000531056 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
UBXN1-211ENST00000531056 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
UBXN1-211ENST00000531056 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
UBXN1-211ENST00000531056 KRTAP5-8O75690 187 aa5.29□□□□□ -1.56
UBXN1-211ENST00000531056 MT3P25713 68 aa5.25□□□□□ -1.57
UBXN1-211ENST00000531056 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
UBXN1-211ENST00000531056 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
UBXN1-211ENST00000531056 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
UBXN1-211ENST00000531056 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
UBXN1-211ENST00000531056 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
UBXN1-211ENST00000531056 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
UBXN1-211ENST00000531056 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
UBXN1-211ENST00000531056 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
UBXN1-211ENST00000531056 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
UBXN1-211ENST00000531056 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
UBXN1-211ENST00000531056 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
UBXN1-211ENST00000531056 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
UBXN1-211ENST00000531056 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
UBXN1-211ENST00000531056 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
UBXN1-211ENST00000531056 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
UBXN1-211ENST00000531056 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
UBXN1-211ENST00000531056 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
UBXN1-211ENST00000531056 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
UBXN1-211ENST00000531056 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
UBXN1-211ENST00000531056 INE1O15225 51 aa3.68□□□□□ -1.82
UBXN1-211ENST00000531056 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
UBXN1-211ENST00000531056 PRM1P04553 51 aa3.45□□□□□ -1.86
UBXN1-211ENST00000531056 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
UBXN1-211ENST00000531056 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
UBXN1-211ENST00000531056 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
UBXN1-211ENST00000531056 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 130.7 ms