RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
CCS-206ENST00000530961 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
CCS-206ENST00000530961 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
CCS-206ENST00000530961 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
CCS-206ENST00000530961 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
CCS-206ENST00000530961 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
CCS-206ENST00000530961 MT1EP04732 61 aa5.66□□□□□ -1.5
CCS-206ENST00000530961 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
CCS-206ENST00000530961 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
CCS-206ENST00000530961 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
CCS-206ENST00000530961 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
CCS-206ENST00000530961 ROMO1P60602 79 aa5.56□□□□□ -1.52
CCS-206ENST00000530961 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
CCS-206ENST00000530961 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
CCS-206ENST00000530961 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
CCS-206ENST00000530961 MT1GP13640 62 aa5.49□□□□□ -1.53
CCS-206ENST00000530961 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
CCS-206ENST00000530961 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
CCS-206ENST00000530961 MT1LQ93083 61 aa5.45□□□□□ -1.54
CCS-206ENST00000530961 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
CCS-206ENST00000530961 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
CCS-206ENST00000530961 MT4P47944 62 aa5.4□□□□□ -1.54
CCS-206ENST00000530961 MT1MQ8N339 61 aa5.35□□□□□ -1.55
CCS-206ENST00000530961 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
CCS-206ENST00000530961 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
CCS-206ENST00000530961 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
CCS-206ENST00000530961 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CCS-206ENST00000530961 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
CCS-206ENST00000530961 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
CCS-206ENST00000530961 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CCS-206ENST00000530961 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
CCS-206ENST00000530961 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
CCS-206ENST00000530961 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
CCS-206ENST00000530961 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
CCS-206ENST00000530961 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
CCS-206ENST00000530961 MUC5ACP98088 5654 aa5□□□□□ -1.61
CCS-206ENST00000530961 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
CCS-206ENST00000530961 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
CCS-206ENST00000530961 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
CCS-206ENST00000530961 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
CCS-206ENST00000530961 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
CCS-206ENST00000530961 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
CCS-206ENST00000530961 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
CCS-206ENST00000530961 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
CCS-206ENST00000530961 MT1AP04731 61 aa4.66□□□□□ -1.66
CCS-206ENST00000530961 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
CCS-206ENST00000530961 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
CCS-206ENST00000530961 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
CCS-206ENST00000530961 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
CCS-206ENST00000530961 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
CCS-206ENST00000530961 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
CCS-206ENST00000530961 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
CCS-206ENST00000530961 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
CCS-206ENST00000530961 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
CCS-206ENST00000530961 MT3P25713 68 aa4.27□□□□□ -1.73
CCS-206ENST00000530961 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
CCS-206ENST00000530961 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
CCS-206ENST00000530961 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
CCS-206ENST00000530961 H3BS24 57 aa3.75□□□□□ -1.81
CCS-206ENST00000530961 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
CCS-206ENST00000530961 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
CCS-206ENST00000530961 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
CCS-206ENST00000530961 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
CCS-206ENST00000530961 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
CCS-206ENST00000530961 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
CCS-206ENST00000530961 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
CCS-206ENST00000530961 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CCS-206ENST00000530961 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
CCS-206ENST00000530961 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
CCS-206ENST00000530961 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
CCS-206ENST00000530961 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CCS-206ENST00000530961 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
CCS-206ENST00000530961 INE1O15225 51 aa3.02□□□□□ -1.93
CCS-206ENST00000530961 PRM1P04553 51 aa2.84□□□□□ -1.95
CCS-206ENST00000530961 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CCS-206ENST00000530961 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CCS-206ENST00000530961 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CCS-206ENST00000530961 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms