RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SPRR2DP22532 72 aa7.11□□□□□ -1.27
GMDS-208ENST00000530927 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
GMDS-208ENST00000530927 KRTAP19-7Q3SYF9 63 aa7.05□□□□□ -1.28
GMDS-208ENST00000530927 TNP1P09430 55 aa7.01□□□□□ -1.29
GMDS-208ENST00000530927 MT1EP04732 61 aa6.97□□□□□ -1.29
GMDS-208ENST00000530927 KRTAP2-2Q9BYT5 123 aa6.93□□□□□ -1.3
GMDS-208ENST00000530927 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
GMDS-208ENST00000530927 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
GMDS-208ENST00000530927 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
GMDS-208ENST00000530927 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
GMDS-208ENST00000530927 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
GMDS-208ENST00000530927 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
GMDS-208ENST00000530927 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
GMDS-208ENST00000530927 KRTAP4-12Q9BQ66 201 aa6.82□□□□□ -1.32
GMDS-208ENST00000530927 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
GMDS-208ENST00000530927 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
GMDS-208ENST00000530927 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
GMDS-208ENST00000530927 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
GMDS-208ENST00000530927 MT1LQ93083 61 aa6.68□□□□□ -1.34
GMDS-208ENST00000530927 MT1GP13640 62 aa6.67□□□□□ -1.34
GMDS-208ENST00000530927 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
GMDS-208ENST00000530927 MT1MQ8N339 61 aa6.62□□□□□ -1.35
GMDS-208ENST00000530927 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
GMDS-208ENST00000530927 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
GMDS-208ENST00000530927 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
GMDS-208ENST00000530927 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
GMDS-208ENST00000530927 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
GMDS-208ENST00000530927 MT4P47944 62 aa6.25□□□□□ -1.41
GMDS-208ENST00000530927 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
GMDS-208ENST00000530927 LCE4AQ5TA78 99 aa6.24□□□□□ -1.41
GMDS-208ENST00000530927 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
GMDS-208ENST00000530927 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
GMDS-208ENST00000530927 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
GMDS-208ENST00000530927 H3BS24 57 aa6.18□□□□□ -1.42
GMDS-208ENST00000530927 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
GMDS-208ENST00000530927 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
GMDS-208ENST00000530927 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
GMDS-208ENST00000530927 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
GMDS-208ENST00000530927 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
GMDS-208ENST00000530927 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
GMDS-208ENST00000530927 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
GMDS-208ENST00000530927 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
GMDS-208ENST00000530927 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
GMDS-208ENST00000530927 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
GMDS-208ENST00000530927 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
GMDS-208ENST00000530927 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
GMDS-208ENST00000530927 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
GMDS-208ENST00000530927 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
GMDS-208ENST00000530927 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
GMDS-208ENST00000530927 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
GMDS-208ENST00000530927 MT1AP04731 61 aa5.65□□□□□ -1.5
GMDS-208ENST00000530927 KRTAP5-7Q6L8G8 165 aa5.46□□□□□ -1.54
GMDS-208ENST00000530927 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
GMDS-208ENST00000530927 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
GMDS-208ENST00000530927 INE1O15225 51 aa5.31□□□□□ -1.56
GMDS-208ENST00000530927 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
GMDS-208ENST00000530927 MT3P25713 68 aa5.14□□□□□ -1.59
GMDS-208ENST00000530927 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
GMDS-208ENST00000530927 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
GMDS-208ENST00000530927 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
GMDS-208ENST00000530927 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
GMDS-208ENST00000530927 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
GMDS-208ENST00000530927 LCE1EQ5T753 118 aa4.65□□□□□ -1.66
GMDS-208ENST00000530927 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
GMDS-208ENST00000530927 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
GMDS-208ENST00000530927 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
GMDS-208ENST00000530927 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
GMDS-208ENST00000530927 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
GMDS-208ENST00000530927 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
GMDS-208ENST00000530927 PRM1P04553 51 aa3.85□□□□□ -1.79
GMDS-208ENST00000530927 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
GMDS-208ENST00000530927 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
GMDS-208ENST00000530927 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
GMDS-208ENST00000530927 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
GMDS-208ENST00000530927 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
GMDS-208ENST00000530927 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
GMDS-208ENST00000530927 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 100.7 ms