RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
PUM1-220ENST00000529846 MT3P25713 68 aa2.21□□□□□ -2.06
PUM1-220ENST00000529846 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
PUM1-220ENST00000529846 MT1XP80297 61 aa2.19□□□□□ -2.06
PUM1-220ENST00000529846 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
PUM1-220ENST00000529846 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
PUM1-220ENST00000529846 TNP1P09430 55 aa2.17□□□□□ -2.06
PUM1-220ENST00000529846 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
PUM1-220ENST00000529846 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
PUM1-220ENST00000529846 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
PUM1-220ENST00000529846 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
PUM1-220ENST00000529846 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
PUM1-220ENST00000529846 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
PUM1-220ENST00000529846 NEBP20929 6669 aa2.09□□□□□ -2.07
PUM1-220ENST00000529846 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
PUM1-220ENST00000529846 LCE3AQ5TA76 89 aa2.04□□□□□ -2.08
PUM1-220ENST00000529846 KMT2DO14686 5537 aa2.03□□□□□ -2.08
PUM1-220ENST00000529846 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.08
PUM1-220ENST00000529846 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
PUM1-220ENST00000529846 SPRR2EP22531 72 aa1.98□□□□□ -2.09
PUM1-220ENST00000529846 SPRR2BP35325 72 aa1.98□□□□□ -2.09
PUM1-220ENST00000529846 SPRR2AP35326 72 aa1.98□□□□□ -2.09
PUM1-220ENST00000529846 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
PUM1-220ENST00000529846 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
PUM1-220ENST00000529846 LCE3CQ5T5A8 94 aa1.97□□□□□ -2.09
PUM1-220ENST00000529846 KRTAP19-7Q3SYF9 63 aa1.96□□□□□ -2.1
PUM1-220ENST00000529846 MT1EP04732 61 aa1.95□□□□□ -2.1
PUM1-220ENST00000529846 MT1GP13640 62 aa1.95□□□□□ -2.1
PUM1-220ENST00000529846 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
PUM1-220ENST00000529846 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
PUM1-220ENST00000529846 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
PUM1-220ENST00000529846 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
PUM1-220ENST00000529846 SPRR2DP22532 72 aa1.92□□□□□ -2.1
PUM1-220ENST00000529846 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
PUM1-220ENST00000529846 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
PUM1-220ENST00000529846 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
PUM1-220ENST00000529846 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
PUM1-220ENST00000529846 MT1LQ93083 61 aa1.88□□□□□ -2.11
PUM1-220ENST00000529846 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
PUM1-220ENST00000529846 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
PUM1-220ENST00000529846 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
PUM1-220ENST00000529846 MT1MQ8N339 61 aa1.84□□□□□ -2.11
PUM1-220ENST00000529846 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
PUM1-220ENST00000529846 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
PUM1-220ENST00000529846 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
PUM1-220ENST00000529846 KRTAP5-4Q6L8H1 288 aa1.71□□□□□ -2.14
PUM1-220ENST00000529846 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
PUM1-220ENST00000529846 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
PUM1-220ENST00000529846 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
PUM1-220ENST00000529846 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
PUM1-220ENST00000529846 MT1AP04731 61 aa1.63□□□□□ -2.15
PUM1-220ENST00000529846 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
PUM1-220ENST00000529846 MT4P47944 62 aa1.62□□□□□ -2.15
PUM1-220ENST00000529846 INE1O15225 51 aa1.61□□□□□ -2.15
PUM1-220ENST00000529846 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
PUM1-220ENST00000529846 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
PUM1-220ENST00000529846 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
PUM1-220ENST00000529846 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
PUM1-220ENST00000529846 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
PUM1-220ENST00000529846 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
PUM1-220ENST00000529846 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
PUM1-220ENST00000529846 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
PUM1-220ENST00000529846 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
PUM1-220ENST00000529846 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
PUM1-220ENST00000529846 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
PUM1-220ENST00000529846 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
PUM1-220ENST00000529846 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
PUM1-220ENST00000529846 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
PUM1-220ENST00000529846 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
PUM1-220ENST00000529846 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
PUM1-220ENST00000529846 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
PUM1-220ENST00000529846 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
PUM1-220ENST00000529846 PRM1P04553 51 aa1.17□□□□□ -2.22
PUM1-220ENST00000529846 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
PUM1-220ENST00000529846 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
PUM1-220ENST00000529846 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
PUM1-220ENST00000529846 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
PUM1-220ENST00000529846 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms