RNA–Protein interactions for RNA: ENST00000528856.5

CAPRIN1-205, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-205ENST00000528856 KRTAP2-1Q9BYU5 128 aa8.53□□□□□ -1.04
CAPRIN1-205ENST00000528856 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
CAPRIN1-205ENST00000528856 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
CAPRIN1-205ENST00000528856 MT1GP13640 62 aa8.4□□□□□ -1.06
CAPRIN1-205ENST00000528856 MT1LQ93083 61 aa8.4□□□□□ -1.06
CAPRIN1-205ENST00000528856 KRTAP12-3P60328 96 aa8.3□□□□□ -1.08
CAPRIN1-205ENST00000528856 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
CAPRIN1-205ENST00000528856 MT1MQ8N339 61 aa8.29□□□□□ -1.08
CAPRIN1-205ENST00000528856 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
CAPRIN1-205ENST00000528856 DSTQ03001 7570 aaKnown RBP8.21□□□□□ -1.1
CAPRIN1-205ENST00000528856 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
CAPRIN1-205ENST00000528856 KRTAP4-3Q9BYR4 195 aa8.11□□□□□ -1.11
CAPRIN1-205ENST00000528856 GPR98Q8WXG9 6306 aa8.1□□□□□ -1.11
CAPRIN1-205ENST00000528856 ROMO1P60602 79 aa8.1□□□□□ -1.11
CAPRIN1-205ENST00000528856 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
CAPRIN1-205ENST00000528856 KRTAP15-1Q3LI76 137 aa7.86□□□□□ -1.15
CAPRIN1-205ENST00000528856 KRTAP4-9Q9BYQ8 210 aa7.85□□□□□ -1.15
CAPRIN1-205ENST00000528856 KRTAP19-4Q3LI73 84 aa7.8□□□□□ -1.16
CAPRIN1-205ENST00000528856 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
CAPRIN1-205ENST00000528856 KRTAP5-4Q6L8H1 288 aa7.72□□□□□ -1.17
CAPRIN1-205ENST00000528856 LCE1DQ5T752 114 aa7.71□□□□□ -1.18
CAPRIN1-205ENST00000528856 BRK1Q8WUW1 75 aa7.69□□□□□ -1.18
CAPRIN1-205ENST00000528856 LCE3CQ5T5A8 94 aa7.68□□□□□ -1.18
CAPRIN1-205ENST00000528856 MT4P47944 62 aa7.65□□□□□ -1.18
CAPRIN1-205ENST00000528856 HMCN1Q96RW7 5635 aa7.62□□□□□ -1.19
CAPRIN1-205ENST00000528856 LOC100996750A0A140TA64 210 aa7.58□□□□□ -1.2
CAPRIN1-205ENST00000528856 KRTAP5-5Q701N2 237 aaPredicted RBP7.58□□□□□ -1.2
CAPRIN1-205ENST00000528856 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
CAPRIN1-205ENST00000528856 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
CAPRIN1-205ENST00000528856 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
CAPRIN1-205ENST00000528856 KRTAP12-4P60329 112 aa7.25□□□□□ -1.25
CAPRIN1-205ENST00000528856 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
CAPRIN1-205ENST00000528856 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
CAPRIN1-205ENST00000528856 SYNE1Q8NF91 8797 aaKnown RBP7.23□□□□□ -1.25
CAPRIN1-205ENST00000528856 AHNAK2Q8IVF2 5795 aa7.22□□□□□ -1.25
CAPRIN1-205ENST00000528856 MT1AP04731 61 aa7.15□□□□□ -1.26
CAPRIN1-205ENST00000528856 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
CAPRIN1-205ENST00000528856 KRTAP5-3Q6L8H2 238 aa7.05□□□□□ -1.28
CAPRIN1-205ENST00000528856 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
CAPRIN1-205ENST00000528856 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
CAPRIN1-205ENST00000528856 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
CAPRIN1-205ENST00000528856 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
CAPRIN1-205ENST00000528856 KRTAP5-2Q701N4 177 aa6.83□□□□□ -1.32
CAPRIN1-205ENST00000528856 KRTAP5-7Q6L8G8 165 aa6.77□□□□□ -1.33
CAPRIN1-205ENST00000528856 KRTAP6-2Q3LI66 62 aa6.71□□□□□ -1.34
CAPRIN1-205ENST00000528856 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
CAPRIN1-205ENST00000528856 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
CAPRIN1-205ENST00000528856 MT3P25713 68 aa6.5□□□□□ -1.37
CAPRIN1-205ENST00000528856 KRTAP5-8O75690 187 aa6.33□□□□□ -1.4
CAPRIN1-205ENST00000528856 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
CAPRIN1-205ENST00000528856 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
CAPRIN1-205ENST00000528856 AHNAKQ09666 5890 aaKnown RBP6.19□□□□□ -1.42
CAPRIN1-205ENST00000528856 KRTAP5-1Q6L8H4 278 aa6.06□□□□□ -1.44
CAPRIN1-205ENST00000528856 MUC5ACP98088 5654 aa6.05□□□□□ -1.44
CAPRIN1-205ENST00000528856 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
CAPRIN1-205ENST00000528856 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
CAPRIN1-205ENST00000528856 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
CAPRIN1-205ENST00000528856 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
CAPRIN1-205ENST00000528856 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
CAPRIN1-205ENST00000528856 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
CAPRIN1-205ENST00000528856 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
CAPRIN1-205ENST00000528856 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
CAPRIN1-205ENST00000528856 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
CAPRIN1-205ENST00000528856 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
CAPRIN1-205ENST00000528856 H3BS24 57 aa4.94□□□□□ -1.62
CAPRIN1-205ENST00000528856 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
CAPRIN1-205ENST00000528856 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
CAPRIN1-205ENST00000528856 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
CAPRIN1-205ENST00000528856 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
CAPRIN1-205ENST00000528856 KRTAP21-2Q3LI59 83 aa4.68□□□□□ -1.66
CAPRIN1-205ENST00000528856 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
CAPRIN1-205ENST00000528856 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
CAPRIN1-205ENST00000528856 PRM1P04553 51 aa4.17□□□□□ -1.74
CAPRIN1-205ENST00000528856 INE1O15225 51 aa3.96□□□□□ -1.78
CAPRIN1-205ENST00000528856 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
CAPRIN1-205ENST00000528856 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CAPRIN1-205ENST00000528856 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
CAPRIN1-205ENST00000528856 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 100.3 ms