RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
RPS3-210ENST00000528439 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
RPS3-210ENST00000528439 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
RPS3-210ENST00000528439 KMT2DO14686 5537 aa3.9□□□□□ -1.78
RPS3-210ENST00000528439 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
RPS3-210ENST00000528439 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
RPS3-210ENST00000528439 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
RPS3-210ENST00000528439 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
RPS3-210ENST00000528439 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
RPS3-210ENST00000528439 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
RPS3-210ENST00000528439 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
RPS3-210ENST00000528439 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
RPS3-210ENST00000528439 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
RPS3-210ENST00000528439 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
RPS3-210ENST00000528439 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
RPS3-210ENST00000528439 MT1EP04732 61 aa3.69□□□□□ -1.82
RPS3-210ENST00000528439 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
RPS3-210ENST00000528439 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
RPS3-210ENST00000528439 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
RPS3-210ENST00000528439 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
RPS3-210ENST00000528439 MT1LQ93083 61 aa3.6□□□□□ -1.83
RPS3-210ENST00000528439 SPRR2EP22531 72 aa3.58□□□□□ -1.84
RPS3-210ENST00000528439 SPRR2BP35325 72 aa3.58□□□□□ -1.84
RPS3-210ENST00000528439 SPRR2AP35326 72 aa3.58□□□□□ -1.84
RPS3-210ENST00000528439 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
RPS3-210ENST00000528439 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
RPS3-210ENST00000528439 NEBP20929 6669 aa3.56□□□□□ -1.84
RPS3-210ENST00000528439 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
RPS3-210ENST00000528439 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
RPS3-210ENST00000528439 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
RPS3-210ENST00000528439 MT1MQ8N339 61 aa3.48□□□□□ -1.85
RPS3-210ENST00000528439 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
RPS3-210ENST00000528439 MT1GP13640 62 aa3.46□□□□□ -1.86
RPS3-210ENST00000528439 SPRR2DP22532 72 aa3.46□□□□□ -1.86
RPS3-210ENST00000528439 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
RPS3-210ENST00000528439 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
RPS3-210ENST00000528439 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
RPS3-210ENST00000528439 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
RPS3-210ENST00000528439 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
RPS3-210ENST00000528439 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
RPS3-210ENST00000528439 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
RPS3-210ENST00000528439 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
RPS3-210ENST00000528439 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
RPS3-210ENST00000528439 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
RPS3-210ENST00000528439 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
RPS3-210ENST00000528439 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
RPS3-210ENST00000528439 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
RPS3-210ENST00000528439 MT1AP04731 61 aa3.05□□□□□ -1.92
RPS3-210ENST00000528439 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
RPS3-210ENST00000528439 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
RPS3-210ENST00000528439 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
RPS3-210ENST00000528439 MT4P47944 62 aa3□□□□□ -1.93
RPS3-210ENST00000528439 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
RPS3-210ENST00000528439 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
RPS3-210ENST00000528439 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
RPS3-210ENST00000528439 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
RPS3-210ENST00000528439 MT3P25713 68 aa2.81□□□□□ -1.96
RPS3-210ENST00000528439 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
RPS3-210ENST00000528439 INE1O15225 51 aa2.75□□□□□ -1.97
RPS3-210ENST00000528439 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
RPS3-210ENST00000528439 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
RPS3-210ENST00000528439 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
RPS3-210ENST00000528439 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
RPS3-210ENST00000528439 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
RPS3-210ENST00000528439 LCE1FQ5T754 118 aa2.54□□□□□ -2
RPS3-210ENST00000528439 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
RPS3-210ENST00000528439 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
RPS3-210ENST00000528439 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
RPS3-210ENST00000528439 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
RPS3-210ENST00000528439 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
RPS3-210ENST00000528439 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
RPS3-210ENST00000528439 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
RPS3-210ENST00000528439 PRM1P04553 51 aa2.16□□□□□ -2.06
RPS3-210ENST00000528439 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
RPS3-210ENST00000528439 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
RPS3-210ENST00000528439 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
RPS3-210ENST00000528439 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
RPS3-210ENST00000528439 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms