RNA–Protein interactions for RNA: ENST00000528406.1

NUP214-219, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-219ENST00000528406 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
NUP214-219ENST00000528406 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
NUP214-219ENST00000528406 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
NUP214-219ENST00000528406 MT1EP04732 61 aa4.98□□□□□ -1.61
NUP214-219ENST00000528406 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
NUP214-219ENST00000528406 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
NUP214-219ENST00000528406 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
NUP214-219ENST00000528406 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
NUP214-219ENST00000528406 ROMO1P60602 79 aa4.93□□□□□ -1.62
NUP214-219ENST00000528406 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
NUP214-219ENST00000528406 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.62
NUP214-219ENST00000528406 MT4P47944 62 aa4.9□□□□□ -1.63
NUP214-219ENST00000528406 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
NUP214-219ENST00000528406 MT1GP13640 62 aa4.86□□□□□ -1.63
NUP214-219ENST00000528406 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
NUP214-219ENST00000528406 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
NUP214-219ENST00000528406 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
NUP214-219ENST00000528406 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
NUP214-219ENST00000528406 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
NUP214-219ENST00000528406 MT1LQ93083 61 aa4.8□□□□□ -1.64
NUP214-219ENST00000528406 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
NUP214-219ENST00000528406 MT1MQ8N339 61 aa4.72□□□□□ -1.65
NUP214-219ENST00000528406 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
NUP214-219ENST00000528406 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
NUP214-219ENST00000528406 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
NUP214-219ENST00000528406 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
NUP214-219ENST00000528406 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
NUP214-219ENST00000528406 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
NUP214-219ENST00000528406 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
NUP214-219ENST00000528406 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
NUP214-219ENST00000528406 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
NUP214-219ENST00000528406 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
NUP214-219ENST00000528406 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
NUP214-219ENST00000528406 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
NUP214-219ENST00000528406 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
NUP214-219ENST00000528406 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
NUP214-219ENST00000528406 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
NUP214-219ENST00000528406 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
NUP214-219ENST00000528406 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
NUP214-219ENST00000528406 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
NUP214-219ENST00000528406 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
NUP214-219ENST00000528406 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
NUP214-219ENST00000528406 MT1AP04731 61 aa4.12□□□□□ -1.75
NUP214-219ENST00000528406 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
NUP214-219ENST00000528406 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
NUP214-219ENST00000528406 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
NUP214-219ENST00000528406 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
NUP214-219ENST00000528406 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
NUP214-219ENST00000528406 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
NUP214-219ENST00000528406 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
NUP214-219ENST00000528406 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
NUP214-219ENST00000528406 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
NUP214-219ENST00000528406 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
NUP214-219ENST00000528406 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
NUP214-219ENST00000528406 MT3P25713 68 aa3.81□□□□□ -1.8
NUP214-219ENST00000528406 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
NUP214-219ENST00000528406 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
NUP214-219ENST00000528406 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
NUP214-219ENST00000528406 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
NUP214-219ENST00000528406 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
NUP214-219ENST00000528406 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
NUP214-219ENST00000528406 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
NUP214-219ENST00000528406 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
NUP214-219ENST00000528406 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
NUP214-219ENST00000528406 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
NUP214-219ENST00000528406 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
NUP214-219ENST00000528406 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
NUP214-219ENST00000528406 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
NUP214-219ENST00000528406 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
NUP214-219ENST00000528406 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
NUP214-219ENST00000528406 INE1O15225 51 aa2.67□□□□□ -1.98
NUP214-219ENST00000528406 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
NUP214-219ENST00000528406 PRM1P04553 51 aa2.48□□□□□ -2.01
NUP214-219ENST00000528406 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
NUP214-219ENST00000528406 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
NUP214-219ENST00000528406 H3BS24 57 aa2.27□□□□□ -2.05
NUP214-219ENST00000528406 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
NUP214-219ENST00000528406 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms