RNA–Protein interactions for RNA: ENST00000527951.5

PDZD3-208, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-208ENST00000527951 TNP1P09430 55 aa6.48□□□□□ -1.37
PDZD3-208ENST00000527951 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
PDZD3-208ENST00000527951 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
PDZD3-208ENST00000527951 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
PDZD3-208ENST00000527951 MT1EP04732 61 aa6.41□□□□□ -1.38
PDZD3-208ENST00000527951 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
PDZD3-208ENST00000527951 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
PDZD3-208ENST00000527951 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
PDZD3-208ENST00000527951 MT4P47944 62 aa6.35□□□□□ -1.39
PDZD3-208ENST00000527951 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
PDZD3-208ENST00000527951 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
PDZD3-208ENST00000527951 ROMO1P60602 79 aa6.24□□□□□ -1.41
PDZD3-208ENST00000527951 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
PDZD3-208ENST00000527951 MT1GP13640 62 aa6.21□□□□□ -1.42
PDZD3-208ENST00000527951 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
PDZD3-208ENST00000527951 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
PDZD3-208ENST00000527951 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
PDZD3-208ENST00000527951 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
PDZD3-208ENST00000527951 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
PDZD3-208ENST00000527951 MT1MQ8N339 61 aa6.14□□□□□ -1.43
PDZD3-208ENST00000527951 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
PDZD3-208ENST00000527951 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
PDZD3-208ENST00000527951 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
PDZD3-208ENST00000527951 MT1LQ93083 61 aa6.03□□□□□ -1.44
PDZD3-208ENST00000527951 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
PDZD3-208ENST00000527951 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
PDZD3-208ENST00000527951 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
PDZD3-208ENST00000527951 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
PDZD3-208ENST00000527951 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
PDZD3-208ENST00000527951 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
PDZD3-208ENST00000527951 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
PDZD3-208ENST00000527951 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
PDZD3-208ENST00000527951 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
PDZD3-208ENST00000527951 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
PDZD3-208ENST00000527951 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
PDZD3-208ENST00000527951 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
PDZD3-208ENST00000527951 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
PDZD3-208ENST00000527951 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
PDZD3-208ENST00000527951 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
PDZD3-208ENST00000527951 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
PDZD3-208ENST00000527951 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
PDZD3-208ENST00000527951 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
PDZD3-208ENST00000527951 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
PDZD3-208ENST00000527951 MUC5ACP98088 5654 aa5.34□□□□□ -1.56
PDZD3-208ENST00000527951 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
PDZD3-208ENST00000527951 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
PDZD3-208ENST00000527951 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
PDZD3-208ENST00000527951 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
PDZD3-208ENST00000527951 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
PDZD3-208ENST00000527951 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
PDZD3-208ENST00000527951 MT1AP04731 61 aa5.11□□□□□ -1.59
PDZD3-208ENST00000527951 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
PDZD3-208ENST00000527951 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
PDZD3-208ENST00000527951 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
PDZD3-208ENST00000527951 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
PDZD3-208ENST00000527951 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
PDZD3-208ENST00000527951 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
PDZD3-208ENST00000527951 H3BS24 57 aa4.7□□□□□ -1.66
PDZD3-208ENST00000527951 MT3P25713 68 aa4.66□□□□□ -1.66
PDZD3-208ENST00000527951 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
PDZD3-208ENST00000527951 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
PDZD3-208ENST00000527951 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
PDZD3-208ENST00000527951 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
PDZD3-208ENST00000527951 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
PDZD3-208ENST00000527951 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
PDZD3-208ENST00000527951 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
PDZD3-208ENST00000527951 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
PDZD3-208ENST00000527951 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
PDZD3-208ENST00000527951 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
PDZD3-208ENST00000527951 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
PDZD3-208ENST00000527951 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
PDZD3-208ENST00000527951 INE1O15225 51 aa3.53□□□□□ -1.84
PDZD3-208ENST00000527951 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
PDZD3-208ENST00000527951 PRM1P04553 51 aa3.18□□□□□ -1.9
PDZD3-208ENST00000527951 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
PDZD3-208ENST00000527951 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
PDZD3-208ENST00000527951 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
PDZD3-208ENST00000527951 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 68.9 ms