RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
RAE1-209ENST00000527947 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
RAE1-209ENST00000527947 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
RAE1-209ENST00000527947 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
RAE1-209ENST00000527947 A8MU10 97 aa4.64□□□□□ -1.67
RAE1-209ENST00000527947 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
RAE1-209ENST00000527947 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
RAE1-209ENST00000527947 A6NED7 52 aa4.57□□□□□ -1.68
RAE1-209ENST00000527947 UQCR11O14957 56 aa4.57□□□□□ -1.68
RAE1-209ENST00000527947 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
RAE1-209ENST00000527947 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
RAE1-209ENST00000527947 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
RAE1-209ENST00000527947 TNP1P09430 55 aa4.48□□□□□ -1.69
RAE1-209ENST00000527947 MT1EP04732 61 aa4.46□□□□□ -1.69
RAE1-209ENST00000527947 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.69
RAE1-209ENST00000527947 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
RAE1-209ENST00000527947 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
RAE1-209ENST00000527947 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
RAE1-209ENST00000527947 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
RAE1-209ENST00000527947 K7ERS5 55 aa4.38□□□□□ -1.71
RAE1-209ENST00000527947 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
RAE1-209ENST00000527947 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
RAE1-209ENST00000527947 MT1GP13640 62 aa4.35□□□□□ -1.71
RAE1-209ENST00000527947 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
RAE1-209ENST00000527947 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
RAE1-209ENST00000527947 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
RAE1-209ENST00000527947 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
RAE1-209ENST00000527947 MT1LQ93083 61 aa4.29□□□□□ -1.72
RAE1-209ENST00000527947 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
RAE1-209ENST00000527947 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
RAE1-209ENST00000527947 MT1MQ8N339 61 aa4.24□□□□□ -1.73
RAE1-209ENST00000527947 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
RAE1-209ENST00000527947 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
RAE1-209ENST00000527947 MT4P47944 62 aa4.11□□□□□ -1.75
RAE1-209ENST00000527947 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
RAE1-209ENST00000527947 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
RAE1-209ENST00000527947 ROMO1P60602 79 aa4.09□□□□□ -1.75
RAE1-209ENST00000527947 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
RAE1-209ENST00000527947 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
RAE1-209ENST00000527947 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
RAE1-209ENST00000527947 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
RAE1-209ENST00000527947 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
RAE1-209ENST00000527947 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
RAE1-209ENST00000527947 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.8
RAE1-209ENST00000527947 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
RAE1-209ENST00000527947 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
RAE1-209ENST00000527947 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
RAE1-209ENST00000527947 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
RAE1-209ENST00000527947 MT1AP04731 61 aa3.66□□□□□ -1.82
RAE1-209ENST00000527947 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
RAE1-209ENST00000527947 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
RAE1-209ENST00000527947 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
RAE1-209ENST00000527947 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
RAE1-209ENST00000527947 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
RAE1-209ENST00000527947 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
RAE1-209ENST00000527947 MT3P25713 68 aa3.36□□□□□ -1.87
RAE1-209ENST00000527947 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
RAE1-209ENST00000527947 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
RAE1-209ENST00000527947 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
RAE1-209ENST00000527947 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
RAE1-209ENST00000527947 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
RAE1-209ENST00000527947 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
RAE1-209ENST00000527947 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
RAE1-209ENST00000527947 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
RAE1-209ENST00000527947 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
RAE1-209ENST00000527947 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
RAE1-209ENST00000527947 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
RAE1-209ENST00000527947 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
RAE1-209ENST00000527947 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
RAE1-209ENST00000527947 INE1O15225 51 aa2.8□□□□□ -1.96
RAE1-209ENST00000527947 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
RAE1-209ENST00000527947 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
RAE1-209ENST00000527947 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
RAE1-209ENST00000527947 PRM1P04553 51 aa2.13□□□□□ -2.07
RAE1-209ENST00000527947 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
RAE1-209ENST00000527947 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
RAE1-209ENST00000527947 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 105 ms