RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
NXF1-206ENST00000527902 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
NXF1-206ENST00000527902 MT1LQ93083 61 aa6.36□□□□□ -1.39
NXF1-206ENST00000527902 MT1GP13640 62 aa6.33□□□□□ -1.4
NXF1-206ENST00000527902 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
NXF1-206ENST00000527902 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
NXF1-206ENST00000527902 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
NXF1-206ENST00000527902 MT1MQ8N339 61 aa6.27□□□□□ -1.41
NXF1-206ENST00000527902 ROMO1P60602 79 aa6.24□□□□□ -1.41
NXF1-206ENST00000527902 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
NXF1-206ENST00000527902 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
NXF1-206ENST00000527902 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
NXF1-206ENST00000527902 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
NXF1-206ENST00000527902 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
NXF1-206ENST00000527902 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
NXF1-206ENST00000527902 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
NXF1-206ENST00000527902 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
NXF1-206ENST00000527902 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
NXF1-206ENST00000527902 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.47
NXF1-206ENST00000527902 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
NXF1-206ENST00000527902 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
NXF1-206ENST00000527902 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
NXF1-206ENST00000527902 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
NXF1-206ENST00000527902 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
NXF1-206ENST00000527902 MT4P47944 62 aa5.73□□□□□ -1.49
NXF1-206ENST00000527902 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
NXF1-206ENST00000527902 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
NXF1-206ENST00000527902 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
NXF1-206ENST00000527902 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
NXF1-206ENST00000527902 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
NXF1-206ENST00000527902 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
NXF1-206ENST00000527902 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
NXF1-206ENST00000527902 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
NXF1-206ENST00000527902 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
NXF1-206ENST00000527902 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
NXF1-206ENST00000527902 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
NXF1-206ENST00000527902 MT1AP04731 61 aa5.4□□□□□ -1.54
NXF1-206ENST00000527902 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
NXF1-206ENST00000527902 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
NXF1-206ENST00000527902 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
NXF1-206ENST00000527902 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
NXF1-206ENST00000527902 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
NXF1-206ENST00000527902 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
NXF1-206ENST00000527902 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
NXF1-206ENST00000527902 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
NXF1-206ENST00000527902 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
NXF1-206ENST00000527902 SVIPQ8NHG7 77 aa4.93□□□□□ -1.62
NXF1-206ENST00000527902 MT3P25713 68 aa4.9□□□□□ -1.63
NXF1-206ENST00000527902 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
NXF1-206ENST00000527902 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
NXF1-206ENST00000527902 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
NXF1-206ENST00000527902 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
NXF1-206ENST00000527902 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
NXF1-206ENST00000527902 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
NXF1-206ENST00000527902 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
NXF1-206ENST00000527902 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
NXF1-206ENST00000527902 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
NXF1-206ENST00000527902 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
NXF1-206ENST00000527902 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
NXF1-206ENST00000527902 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
NXF1-206ENST00000527902 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
NXF1-206ENST00000527902 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
NXF1-206ENST00000527902 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
NXF1-206ENST00000527902 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
NXF1-206ENST00000527902 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
NXF1-206ENST00000527902 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
NXF1-206ENST00000527902 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
NXF1-206ENST00000527902 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
NXF1-206ENST00000527902 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
NXF1-206ENST00000527902 PRM1P04553 51 aa3.24□□□□□ -1.89
NXF1-206ENST00000527902 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
NXF1-206ENST00000527902 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
NXF1-206ENST00000527902 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
NXF1-206ENST00000527902 INE1O15225 51 aa3.13□□□□□ -1.91
NXF1-206ENST00000527902 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
NXF1-206ENST00000527902 H3BS24 57 aa2.66□□□□□ -1.98
NXF1-206ENST00000527902 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
NXF1-206ENST00000527902 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 163.1 ms