RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
CAPN1-211ENST00000527739 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
CAPN1-211ENST00000527739 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
CAPN1-211ENST00000527739 A6NED7 52 aa6.95□□□□□ -1.3
CAPN1-211ENST00000527739 H3BS24 57 aa6.95□□□□□ -1.3
CAPN1-211ENST00000527739 MT1GP13640 62 aa6.95□□□□□ -1.3
CAPN1-211ENST00000527739 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
CAPN1-211ENST00000527739 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
CAPN1-211ENST00000527739 TNP1P09430 55 aa6.92□□□□□ -1.3
CAPN1-211ENST00000527739 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
CAPN1-211ENST00000527739 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
CAPN1-211ENST00000527739 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
CAPN1-211ENST00000527739 MT1LQ93083 61 aa6.85□□□□□ -1.31
CAPN1-211ENST00000527739 HMCN1Q96RW7 5635 aa6.83□□□□□ -1.32
CAPN1-211ENST00000527739 MT1MQ8N339 61 aa6.83□□□□□ -1.32
CAPN1-211ENST00000527739 MT4P47944 62 aa6.81□□□□□ -1.32
CAPN1-211ENST00000527739 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
CAPN1-211ENST00000527739 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
CAPN1-211ENST00000527739 UQCR11O14957 56 aa6.72□□□□□ -1.33
CAPN1-211ENST00000527739 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
CAPN1-211ENST00000527739 KRTAP5-10Q6L8G5 202 aa6.64□□□□□ -1.35
CAPN1-211ENST00000527739 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
CAPN1-211ENST00000527739 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
CAPN1-211ENST00000527739 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
CAPN1-211ENST00000527739 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
CAPN1-211ENST00000527739 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
CAPN1-211ENST00000527739 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
CAPN1-211ENST00000527739 K7ERS5 55 aa6.5□□□□□ -1.37
CAPN1-211ENST00000527739 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
CAPN1-211ENST00000527739 KRTAP5-7Q6L8G8 165 aa6.4□□□□□ -1.38
CAPN1-211ENST00000527739 KRTAP5-3Q6L8H2 238 aa6.38□□□□□ -1.39
CAPN1-211ENST00000527739 ROMO1P60602 79 aa6.35□□□□□ -1.39
CAPN1-211ENST00000527739 KRTAP20-2Q3LI61 65 aa6.26□□□□□ -1.41
CAPN1-211ENST00000527739 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
CAPN1-211ENST00000527739 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
CAPN1-211ENST00000527739 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
CAPN1-211ENST00000527739 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
CAPN1-211ENST00000527739 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
CAPN1-211ENST00000527739 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
CAPN1-211ENST00000527739 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
CAPN1-211ENST00000527739 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
CAPN1-211ENST00000527739 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
CAPN1-211ENST00000527739 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
CAPN1-211ENST00000527739 NDUFAF8A1L188 74 aa5.84□□□□□ -1.47
CAPN1-211ENST00000527739 MT1AP04731 61 aa5.82□□□□□ -1.48
CAPN1-211ENST00000527739 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
CAPN1-211ENST00000527739 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
CAPN1-211ENST00000527739 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
CAPN1-211ENST00000527739 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
CAPN1-211ENST00000527739 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
CAPN1-211ENST00000527739 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
CAPN1-211ENST00000527739 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
CAPN1-211ENST00000527739 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
CAPN1-211ENST00000527739 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
CAPN1-211ENST00000527739 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
CAPN1-211ENST00000527739 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
CAPN1-211ENST00000527739 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
CAPN1-211ENST00000527739 MT3P25713 68 aa5.36□□□□□ -1.55
CAPN1-211ENST00000527739 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
CAPN1-211ENST00000527739 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
CAPN1-211ENST00000527739 INE1O15225 51 aa5.02□□□□□ -1.61
CAPN1-211ENST00000527739 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
CAPN1-211ENST00000527739 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
CAPN1-211ENST00000527739 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
CAPN1-211ENST00000527739 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
CAPN1-211ENST00000527739 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
CAPN1-211ENST00000527739 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
CAPN1-211ENST00000527739 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
CAPN1-211ENST00000527739 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
CAPN1-211ENST00000527739 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CAPN1-211ENST00000527739 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
CAPN1-211ENST00000527739 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
CAPN1-211ENST00000527739 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
CAPN1-211ENST00000527739 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
CAPN1-211ENST00000527739 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
CAPN1-211ENST00000527739 PRM1P04553 51 aa3.09□□□□□ -1.91
CAPN1-211ENST00000527739 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
CAPN1-211ENST00000527739 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms