RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 MT1EP04732 61 aa8.58□□□□□ -1.04
LRRK1-206ENST00000527698 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
LRRK1-206ENST00000527698 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.06
LRRK1-206ENST00000527698 KRTAP19-3Q7Z4W3 81 aa8.45□□□□□ -1.06
LRRK1-206ENST00000527698 ROMO1P60602 79 aa8.44□□□□□ -1.06
LRRK1-206ENST00000527698 GPR98Q8WXG9 6306 aa8.43□□□□□ -1.06
LRRK1-206ENST00000527698 LCE5AQ5TCM9 118 aa8.41□□□□□ -1.06
LRRK1-206ENST00000527698 DSTQ03001 7570 aaKnown RBP8.38□□□□□ -1.07
LRRK1-206ENST00000527698 MT1GP13640 62 aa8.36□□□□□ -1.07
LRRK1-206ENST00000527698 KRTAP12-3P60328 96 aa8.35□□□□□ -1.07
LRRK1-206ENST00000527698 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
LRRK1-206ENST00000527698 MT1LQ93083 61 aa8.28□□□□□ -1.08
LRRK1-206ENST00000527698 BRK1Q8WUW1 75 aa8.23□□□□□ -1.09
LRRK1-206ENST00000527698 KRTAP4-9Q9BYQ8 210 aa8.22□□□□□ -1.09
LRRK1-206ENST00000527698 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
LRRK1-206ENST00000527698 MT1MQ8N339 61 aa8.13□□□□□ -1.11
LRRK1-206ENST00000527698 LCE1DQ5T752 114 aa8.01□□□□□ -1.13
LRRK1-206ENST00000527698 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
LRRK1-206ENST00000527698 LCE4AQ5TA78 99 aa7.92□□□□□ -1.14
LRRK1-206ENST00000527698 HMCN1Q96RW7 5635 aa7.91□□□□□ -1.14
LRRK1-206ENST00000527698 MT4P47944 62 aa7.83□□□□□ -1.16
LRRK1-206ENST00000527698 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
LRRK1-206ENST00000527698 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
LRRK1-206ENST00000527698 KRTAP4-7Q9BYR0 210 aa7.79□□□□□ -1.16
LRRK1-206ENST00000527698 AHNAK2Q8IVF2 5795 aa7.76□□□□□ -1.17
LRRK1-206ENST00000527698 LCE3CQ5T5A8 94 aa7.74□□□□□ -1.17
LRRK1-206ENST00000527698 KRTAP5-10Q6L8G5 202 aa7.69□□□□□ -1.18
LRRK1-206ENST00000527698 KRTAP5-4Q6L8H1 288 aa7.69□□□□□ -1.18
LRRK1-206ENST00000527698 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
LRRK1-206ENST00000527698 KRTAP4-6Q9BYQ5 205 aa7.58□□□□□ -1.2
LRRK1-206ENST00000527698 KRTAP5-7Q6L8G8 165 aa7.47□□□□□ -1.21
LRRK1-206ENST00000527698 KRTAP5-5Q701N2 237 aaPredicted RBP7.42□□□□□ -1.22
LRRK1-206ENST00000527698 KRTAP5-3Q6L8H2 238 aa7.41□□□□□ -1.22
LRRK1-206ENST00000527698 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
LRRK1-206ENST00000527698 KRTAP20-2Q3LI61 65 aa7.27□□□□□ -1.25
LRRK1-206ENST00000527698 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
LRRK1-206ENST00000527698 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
LRRK1-206ENST00000527698 KRTAP12-4P60329 112 aa7.22□□□□□ -1.25
LRRK1-206ENST00000527698 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
LRRK1-206ENST00000527698 KRTAP9-6A8MVA2 160 aa7.16□□□□□ -1.26
LRRK1-206ENST00000527698 MT1AP04731 61 aa7.08□□□□□ -1.28
LRRK1-206ENST00000527698 SYNE1Q8NF91 8797 aaKnown RBP6.96□□□□□ -1.3
LRRK1-206ENST00000527698 KRTAP6-1Q3LI64 71 aa6.95□□□□□ -1.3
LRRK1-206ENST00000527698 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
LRRK1-206ENST00000527698 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
LRRK1-206ENST00000527698 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
LRRK1-206ENST00000527698 KRTAP5-2Q701N4 177 aa6.66□□□□□ -1.34
LRRK1-206ENST00000527698 KRTAP6-2Q3LI66 62 aa6.57□□□□□ -1.36
LRRK1-206ENST00000527698 KRTAP5-8O75690 187 aa6.54□□□□□ -1.36
LRRK1-206ENST00000527698 MT3P25713 68 aa6.51□□□□□ -1.37
LRRK1-206ENST00000527698 MUC5ACP98088 5654 aa6.5□□□□□ -1.37
LRRK1-206ENST00000527698 AHNAKQ09666 5890 aaKnown RBP6.49□□□□□ -1.37
LRRK1-206ENST00000527698 MUC5BQ9HC84 5762 aaPredicted RBP6.46□□□□□ -1.37
LRRK1-206ENST00000527698 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.4
LRRK1-206ENST00000527698 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
LRRK1-206ENST00000527698 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
LRRK1-206ENST00000527698 KRTAP5-1Q6L8H4 278 aa6.05□□□□□ -1.44
LRRK1-206ENST00000527698 LCE1EQ5T753 118 aa5.9□□□□□ -1.46
LRRK1-206ENST00000527698 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
LRRK1-206ENST00000527698 LCE1CQ5T751 118 aa5.45□□□□□ -1.54
LRRK1-206ENST00000527698 LCE1BQ5T7P3 118 aa5.45□□□□□ -1.54
LRRK1-206ENST00000527698 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
LRRK1-206ENST00000527698 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
LRRK1-206ENST00000527698 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
LRRK1-206ENST00000527698 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.02□□□□□ -1.61
LRRK1-206ENST00000527698 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
LRRK1-206ENST00000527698 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
LRRK1-206ENST00000527698 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
LRRK1-206ENST00000527698 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
LRRK1-206ENST00000527698 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
LRRK1-206ENST00000527698 INE1O15225 51 aa4.52□□□□□ -1.69
LRRK1-206ENST00000527698 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
LRRK1-206ENST00000527698 PRM1P04553 51 aa4.28□□□□□ -1.72
LRRK1-206ENST00000527698 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
LRRK1-206ENST00000527698 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
LRRK1-206ENST00000527698 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
LRRK1-206ENST00000527698 H3BS24 57 aa3.11□□□□□ -1.91
LRRK1-206ENST00000527698 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 46.9 ms