RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 ROMO1P60602 79 aa2.73□□□□□ -1.97
LINC01001-202ENST00000527683 K7ERS5 55 aa2.72□□□□□ -1.97
LINC01001-202ENST00000527683 P0C880 135 aa2.72□□□□□ -1.97
LINC01001-202ENST00000527683 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
LINC01001-202ENST00000527683 M0QZ58 72 aa2.71□□□□□ -1.98
LINC01001-202ENST00000527683 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
LINC01001-202ENST00000527683 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
LINC01001-202ENST00000527683 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
LINC01001-202ENST00000527683 R4GN34 69 aa2.67□□□□□ -1.98
LINC01001-202ENST00000527683 NEBP20929 6669 aa2.66□□□□□ -1.98
LINC01001-202ENST00000527683 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
LINC01001-202ENST00000527683 CRIPTQ9P021 101 aa2.65□□□□□ -1.99
LINC01001-202ENST00000527683 A0A0D9SG42 100 aa2.64□□□□□ -1.99
LINC01001-202ENST00000527683 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
LINC01001-202ENST00000527683 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
LINC01001-202ENST00000527683 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
LINC01001-202ENST00000527683 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
LINC01001-202ENST00000527683 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
LINC01001-202ENST00000527683 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
LINC01001-202ENST00000527683 MT1BP07438 61 aa2.53□□□□□ -2
LINC01001-202ENST00000527683 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
LINC01001-202ENST00000527683 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
LINC01001-202ENST00000527683 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
LINC01001-202ENST00000527683 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
LINC01001-202ENST00000527683 CAMK2N1Q7Z7J9 78 aa2.5□□□□□ -2.01
LINC01001-202ENST00000527683 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
LINC01001-202ENST00000527683 KMT2DO14686 5537 aa2.48□□□□□ -2.01
LINC01001-202ENST00000527683 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
LINC01001-202ENST00000527683 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
LINC01001-202ENST00000527683 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
LINC01001-202ENST00000527683 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
LINC01001-202ENST00000527683 TNP1P09430 55 aa2.41□□□□□ -2.02
LINC01001-202ENST00000527683 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
LINC01001-202ENST00000527683 SPRR2EP22531 72 aa2.4□□□□□ -2.03
LINC01001-202ENST00000527683 SPRR2BP35325 72 aa2.4□□□□□ -2.03
LINC01001-202ENST00000527683 SPRR2AP35326 72 aa2.4□□□□□ -2.03
LINC01001-202ENST00000527683 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
LINC01001-202ENST00000527683 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
LINC01001-202ENST00000527683 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
LINC01001-202ENST00000527683 MT1XP80297 61 aa2.33□□□□□ -2.04
LINC01001-202ENST00000527683 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
LINC01001-202ENST00000527683 SPRR2DP22532 72 aa2.32□□□□□ -2.04
LINC01001-202ENST00000527683 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
LINC01001-202ENST00000527683 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
LINC01001-202ENST00000527683 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
LINC01001-202ENST00000527683 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
LINC01001-202ENST00000527683 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
LINC01001-202ENST00000527683 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
LINC01001-202ENST00000527683 INE1O15225 51 aa2.14□□□□□ -2.07
LINC01001-202ENST00000527683 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
LINC01001-202ENST00000527683 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
LINC01001-202ENST00000527683 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
LINC01001-202ENST00000527683 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
LINC01001-202ENST00000527683 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
LINC01001-202ENST00000527683 MT1EP04732 61 aa2.07□□□□□ -2.08
LINC01001-202ENST00000527683 MT4P47944 62 aa2.06□□□□□ -2.08
LINC01001-202ENST00000527683 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
LINC01001-202ENST00000527683 MT1GP13640 62 aa2.03□□□□□ -2.08
LINC01001-202ENST00000527683 MT1LQ93083 61 aa2.01□□□□□ -2.09
LINC01001-202ENST00000527683 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
LINC01001-202ENST00000527683 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
LINC01001-202ENST00000527683 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
LINC01001-202ENST00000527683 MT1MQ8N339 61 aa1.97□□□□□ -2.09
LINC01001-202ENST00000527683 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
LINC01001-202ENST00000527683 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
LINC01001-202ENST00000527683 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
LINC01001-202ENST00000527683 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
LINC01001-202ENST00000527683 MT1AP04731 61 aa1.73□□□□□ -2.13
LINC01001-202ENST00000527683 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
LINC01001-202ENST00000527683 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
LINC01001-202ENST00000527683 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
LINC01001-202ENST00000527683 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
LINC01001-202ENST00000527683 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
LINC01001-202ENST00000527683 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
LINC01001-202ENST00000527683 PRM1P04553 51 aa1.37□□□□□ -2.19
LINC01001-202ENST00000527683 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
LINC01001-202ENST00000527683 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
LINC01001-202ENST00000527683 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 40.3 ms