RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 NDUFA1O15239 70 aa1.39□□□□□ -2.19
NXF1-205ENST00000527497 SPART-AS1P0CW21 52 aa1.39□□□□□ -2.19
NXF1-205ENST00000527497 WFDC10BQ8IUB3 73 aa1.39□□□□□ -2.19
NXF1-205ENST00000527497 USH2AO75445 5202 aa1.39□□□□□ -2.19
NXF1-205ENST00000527497 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
NXF1-205ENST00000527497 A0A096LPF7 62 aa1.38□□□□□ -2.19
NXF1-205ENST00000527497 A8MTW9 85 aa1.38□□□□□ -2.19
NXF1-205ENST00000527497 PRCDQ00LT1 54 aa1.38□□□□□ -2.19
NXF1-205ENST00000527497 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
NXF1-205ENST00000527497 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
NXF1-205ENST00000527497 NOP10Q9NPE3 64 aaKnown RBP1.37□□□□□ -2.19
NXF1-205ENST00000527497 HTN1P15515 57 aa1.36□□□□□ -2.19
NXF1-205ENST00000527497 DEFB104AQ8WTQ1 72 aa1.36□□□□□ -2.19
NXF1-205ENST00000527497 S4R3F8 94 aa1.36□□□□□ -2.19
NXF1-205ENST00000527497 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.19
NXF1-205ENST00000527497 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
NXF1-205ENST00000527497 H3BNG1 76 aa1.32□□□□□ -2.2
NXF1-205ENST00000527497 KMT2DO14686 5537 aa1.31□□□□□ -2.2
NXF1-205ENST00000527497 SPINK1P00995 79 aa1.31□□□□□ -2.2
NXF1-205ENST00000527497 PRLHP81277 87 aa1.31□□□□□ -2.2
NXF1-205ENST00000527497 LINC01556Q5JQF7 62 aa1.31□□□□□ -2.2
NXF1-205ENST00000527497 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
NXF1-205ENST00000527497 POLR2KP53803 58 aaKnown RBP1.29□□□□□ -2.2
NXF1-205ENST00000527497 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
NXF1-205ENST00000527497 CLPSL2Q6UWE3 100 aa1.29□□□□□ -2.2
NXF1-205ENST00000527497 KRTAP2-3P0C7H8 128 aa1.28□□□□□ -2.2
NXF1-205ENST00000527497 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
NXF1-205ENST00000527497 KRTAP2-4Q9BYR9 128 aa1.28□□□□□ -2.2
NXF1-205ENST00000527497 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
NXF1-205ENST00000527497 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
NXF1-205ENST00000527497 IGLV5-48A0A075B6I7 105 aa1.26□□□□□ -2.21
NXF1-205ENST00000527497 A0A096LNI7 61 aa1.26□□□□□ -2.21
NXF1-205ENST00000527497 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
NXF1-205ENST00000527497 RPL39LQ96EH5 51 aaKnown RBP1.25□□□□□ -2.21
NXF1-205ENST00000527497 RPL39P62891 51 aaKnown RBP1.24□□□□□ -2.21
NXF1-205ENST00000527497 M0QY20 66 aa1.23□□□□□ -2.21
NXF1-205ENST00000527497 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
NXF1-205ENST00000527497 M0R2T5 61 aa1.22□□□□□ -2.21
NXF1-205ENST00000527497 MMP24-AS1A0A0U1RRL7 71 aa1.21□□□□□ -2.22
NXF1-205ENST00000527497 MT1HP80294 61 aa1.21□□□□□ -2.22
NXF1-205ENST00000527497 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
NXF1-205ENST00000527497 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
NXF1-205ENST00000527497 MT2AP02795 61 aa1.11□□□□□ -2.23
NXF1-205ENST00000527497 MT1FP04733 61 aa1.11□□□□□ -2.23
NXF1-205ENST00000527497 C9orf92A6NGG3 77 aa1.1□□□□□ -2.23
NXF1-205ENST00000527497 PRM1P04553 51 aa1.08□□□□□ -2.24
NXF1-205ENST00000527497 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
NXF1-205ENST00000527497 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
NXF1-205ENST00000527497 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
NXF1-205ENST00000527497 RPS29P62273 56 aaKnown RBP1.04□□□□□ -2.24
NXF1-205ENST00000527497 MUC5ACP98088 5654 aa1.03□□□□□ -2.24
NXF1-205ENST00000527497 M0QZ58 72 aa0.99□□□□□ -2.25
NXF1-205ENST00000527497 MT1BP07438 61 aa0.98□□□□□ -2.25
NXF1-205ENST00000527497 SPRR2EP22531 72 aa0.97□□□□□ -2.25
NXF1-205ENST00000527497 SPRR2BP35325 72 aa0.97□□□□□ -2.25
NXF1-205ENST00000527497 SPRR2AP35326 72 aa0.97□□□□□ -2.25
NXF1-205ENST00000527497 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
NXF1-205ENST00000527497 SPRR2DP22532 72 aa0.94□□□□□ -2.26
NXF1-205ENST00000527497 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
NXF1-205ENST00000527497 TNP1P09430 55 aa0.92□□□□□ -2.26
NXF1-205ENST00000527497 KRTAP19-8Q3LI54 63 aa0.92□□□□□ -2.26
NXF1-205ENST00000527497 SPRR2GQ9BYE4 73 aa0.9□□□□□ -2.27
NXF1-205ENST00000527497 MT1XP80297 61 aa0.89□□□□□ -2.27
NXF1-205ENST00000527497 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
NXF1-205ENST00000527497 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
NXF1-205ENST00000527497 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
NXF1-205ENST00000527497 MT4P47944 62 aa0.85□□□□□ -2.27
NXF1-205ENST00000527497 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
NXF1-205ENST00000527497 MT1EP04732 61 aa0.79□□□□□ -2.28
NXF1-205ENST00000527497 MT1MQ8N339 61 aa0.76□□□□□ -2.29
NXF1-205ENST00000527497 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
NXF1-205ENST00000527497 KRTAP19-5Q3LI72 72 aa0.74□□□□□ -2.29
NXF1-205ENST00000527497 MT1LQ93083 61 aa0.73□□□□□ -2.29
NXF1-205ENST00000527497 MT1GP13640 62 aa0.71□□□□□ -2.3
NXF1-205ENST00000527497 MT1AP04731 61 aa0.67□□□□□ -2.3
NXF1-205ENST00000527497 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
NXF1-205ENST00000527497 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
NXF1-205ENST00000527497 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 97.3 ms