RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
CAPN1-207ENST00000527189 ROMO1P60602 79 aa5.22□□□□□ -1.57
CAPN1-207ENST00000527189 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
CAPN1-207ENST00000527189 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
CAPN1-207ENST00000527189 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
CAPN1-207ENST00000527189 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
CAPN1-207ENST00000527189 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
CAPN1-207ENST00000527189 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CAPN1-207ENST00000527189 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
CAPN1-207ENST00000527189 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
CAPN1-207ENST00000527189 MT1EP04732 61 aa4.99□□□□□ -1.61
CAPN1-207ENST00000527189 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
CAPN1-207ENST00000527189 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
CAPN1-207ENST00000527189 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
CAPN1-207ENST00000527189 TNP1P09430 55 aa4.93□□□□□ -1.62
CAPN1-207ENST00000527189 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.63
CAPN1-207ENST00000527189 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
CAPN1-207ENST00000527189 MT1GP13640 62 aa4.88□□□□□ -1.63
CAPN1-207ENST00000527189 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
CAPN1-207ENST00000527189 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
CAPN1-207ENST00000527189 MT4P47944 62 aa4.81□□□□□ -1.64
CAPN1-207ENST00000527189 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
CAPN1-207ENST00000527189 MT1MQ8N339 61 aa4.75□□□□□ -1.65
CAPN1-207ENST00000527189 MT1LQ93083 61 aa4.75□□□□□ -1.65
CAPN1-207ENST00000527189 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
CAPN1-207ENST00000527189 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
CAPN1-207ENST00000527189 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
CAPN1-207ENST00000527189 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
CAPN1-207ENST00000527189 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
CAPN1-207ENST00000527189 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
CAPN1-207ENST00000527189 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
CAPN1-207ENST00000527189 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
CAPN1-207ENST00000527189 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
CAPN1-207ENST00000527189 H3BS24 57 aa4.56□□□□□ -1.68
CAPN1-207ENST00000527189 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CAPN1-207ENST00000527189 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
CAPN1-207ENST00000527189 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
CAPN1-207ENST00000527189 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
CAPN1-207ENST00000527189 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
CAPN1-207ENST00000527189 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
CAPN1-207ENST00000527189 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
CAPN1-207ENST00000527189 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
CAPN1-207ENST00000527189 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CAPN1-207ENST00000527189 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
CAPN1-207ENST00000527189 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
CAPN1-207ENST00000527189 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
CAPN1-207ENST00000527189 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
CAPN1-207ENST00000527189 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
CAPN1-207ENST00000527189 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
CAPN1-207ENST00000527189 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
CAPN1-207ENST00000527189 MT1AP04731 61 aa4.06□□□□□ -1.76
CAPN1-207ENST00000527189 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
CAPN1-207ENST00000527189 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
CAPN1-207ENST00000527189 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
CAPN1-207ENST00000527189 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
CAPN1-207ENST00000527189 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
CAPN1-207ENST00000527189 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CAPN1-207ENST00000527189 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
CAPN1-207ENST00000527189 MT3P25713 68 aa3.74□□□□□ -1.81
CAPN1-207ENST00000527189 INE1O15225 51 aa3.66□□□□□ -1.82
CAPN1-207ENST00000527189 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
CAPN1-207ENST00000527189 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CAPN1-207ENST00000527189 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CAPN1-207ENST00000527189 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
CAPN1-207ENST00000527189 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CAPN1-207ENST00000527189 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
CAPN1-207ENST00000527189 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CAPN1-207ENST00000527189 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CAPN1-207ENST00000527189 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
CAPN1-207ENST00000527189 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CAPN1-207ENST00000527189 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
CAPN1-207ENST00000527189 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CAPN1-207ENST00000527189 PRM1P04553 51 aa2.69□□□□□ -1.98
CAPN1-207ENST00000527189 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CAPN1-207ENST00000527189 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CAPN1-207ENST00000527189 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
CAPN1-207ENST00000527189 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CAPN1-207ENST00000527189 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms