RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 MT1EP04732 61 aa5.82□□□□□ -1.48
CAPRIN1-204ENST00000526494 SVIPQ8NHG7 77 aa5.78□□□□□ -1.48
CAPRIN1-204ENST00000526494 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
CAPRIN1-204ENST00000526494 MT1LQ93083 61 aa5.67□□□□□ -1.5
CAPRIN1-204ENST00000526494 SPRR2EP22531 72 aa5.65□□□□□ -1.5
CAPRIN1-204ENST00000526494 SPRR2BP35325 72 aa5.65□□□□□ -1.5
CAPRIN1-204ENST00000526494 SPRR2AP35326 72 aa5.65□□□□□ -1.5
CAPRIN1-204ENST00000526494 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
CAPRIN1-204ENST00000526494 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
CAPRIN1-204ENST00000526494 MT1GP13640 62 aa5.56□□□□□ -1.52
CAPRIN1-204ENST00000526494 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
CAPRIN1-204ENST00000526494 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
CAPRIN1-204ENST00000526494 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
CAPRIN1-204ENST00000526494 MT1MQ8N339 61 aa5.49□□□□□ -1.53
CAPRIN1-204ENST00000526494 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
CAPRIN1-204ENST00000526494 SPRR2DP22532 72 aa5.45□□□□□ -1.54
CAPRIN1-204ENST00000526494 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CAPRIN1-204ENST00000526494 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
CAPRIN1-204ENST00000526494 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
CAPRIN1-204ENST00000526494 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
CAPRIN1-204ENST00000526494 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
CAPRIN1-204ENST00000526494 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
CAPRIN1-204ENST00000526494 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
CAPRIN1-204ENST00000526494 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
CAPRIN1-204ENST00000526494 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CAPRIN1-204ENST00000526494 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
CAPRIN1-204ENST00000526494 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
CAPRIN1-204ENST00000526494 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
CAPRIN1-204ENST00000526494 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
CAPRIN1-204ENST00000526494 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
CAPRIN1-204ENST00000526494 H3BS24 57 aa4.86□□□□□ -1.63
CAPRIN1-204ENST00000526494 MT1AP04731 61 aa4.83□□□□□ -1.64
CAPRIN1-204ENST00000526494 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
CAPRIN1-204ENST00000526494 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
CAPRIN1-204ENST00000526494 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
CAPRIN1-204ENST00000526494 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
CAPRIN1-204ENST00000526494 MT4P47944 62 aa4.73□□□□□ -1.65
CAPRIN1-204ENST00000526494 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
CAPRIN1-204ENST00000526494 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
CAPRIN1-204ENST00000526494 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
CAPRIN1-204ENST00000526494 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
CAPRIN1-204ENST00000526494 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
CAPRIN1-204ENST00000526494 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
CAPRIN1-204ENST00000526494 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
CAPRIN1-204ENST00000526494 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
CAPRIN1-204ENST00000526494 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
CAPRIN1-204ENST00000526494 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
CAPRIN1-204ENST00000526494 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
CAPRIN1-204ENST00000526494 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
CAPRIN1-204ENST00000526494 MT3P25713 68 aa4.39□□□□□ -1.71
CAPRIN1-204ENST00000526494 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
CAPRIN1-204ENST00000526494 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
CAPRIN1-204ENST00000526494 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
CAPRIN1-204ENST00000526494 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
CAPRIN1-204ENST00000526494 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
CAPRIN1-204ENST00000526494 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
CAPRIN1-204ENST00000526494 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
CAPRIN1-204ENST00000526494 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CAPRIN1-204ENST00000526494 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
CAPRIN1-204ENST00000526494 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
CAPRIN1-204ENST00000526494 INE1O15225 51 aa3.85□□□□□ -1.79
CAPRIN1-204ENST00000526494 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
CAPRIN1-204ENST00000526494 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
CAPRIN1-204ENST00000526494 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
CAPRIN1-204ENST00000526494 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
CAPRIN1-204ENST00000526494 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
CAPRIN1-204ENST00000526494 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
CAPRIN1-204ENST00000526494 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
CAPRIN1-204ENST00000526494 PRM1P04553 51 aa3.34□□□□□ -1.87
CAPRIN1-204ENST00000526494 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CAPRIN1-204ENST00000526494 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
CAPRIN1-204ENST00000526494 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
CAPRIN1-204ENST00000526494 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
CAPRIN1-204ENST00000526494 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CAPRIN1-204ENST00000526494 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CAPRIN1-204ENST00000526494 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CAPRIN1-204ENST00000526494 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
CAPRIN1-204ENST00000526494 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 69.1 ms