RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 MT1XP80297 61 aa4.93□□□□□ -1.62
CAPN1-204ENST00000526468 SPRR2DP22532 72 aa4.88□□□□□ -1.63
CAPN1-204ENST00000526468 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CAPN1-204ENST00000526468 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
CAPN1-204ENST00000526468 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
CAPN1-204ENST00000526468 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
CAPN1-204ENST00000526468 CAMK2N1Q7Z7J9 78 aa4.78□□□□□ -1.64
CAPN1-204ENST00000526468 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
CAPN1-204ENST00000526468 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
CAPN1-204ENST00000526468 TNP1P09430 55 aa4.76□□□□□ -1.65
CAPN1-204ENST00000526468 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
CAPN1-204ENST00000526468 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
CAPN1-204ENST00000526468 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
CAPN1-204ENST00000526468 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
CAPN1-204ENST00000526468 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CAPN1-204ENST00000526468 INE1O15225 51 aa4.6□□□□□ -1.67
CAPN1-204ENST00000526468 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
CAPN1-204ENST00000526468 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
CAPN1-204ENST00000526468 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
CAPN1-204ENST00000526468 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
CAPN1-204ENST00000526468 MT1EP04732 61 aa4.39□□□□□ -1.71
CAPN1-204ENST00000526468 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
CAPN1-204ENST00000526468 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
CAPN1-204ENST00000526468 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
CAPN1-204ENST00000526468 MT4P47944 62 aa4.29□□□□□ -1.72
CAPN1-204ENST00000526468 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
CAPN1-204ENST00000526468 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
CAPN1-204ENST00000526468 MT1GP13640 62 aa4.23□□□□□ -1.73
CAPN1-204ENST00000526468 MT1MQ8N339 61 aa4.2□□□□□ -1.74
CAPN1-204ENST00000526468 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
CAPN1-204ENST00000526468 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
CAPN1-204ENST00000526468 MT1LQ93083 61 aa4.15□□□□□ -1.75
CAPN1-204ENST00000526468 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
CAPN1-204ENST00000526468 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CAPN1-204ENST00000526468 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CAPN1-204ENST00000526468 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
CAPN1-204ENST00000526468 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
CAPN1-204ENST00000526468 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
CAPN1-204ENST00000526468 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
CAPN1-204ENST00000526468 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
CAPN1-204ENST00000526468 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
CAPN1-204ENST00000526468 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
CAPN1-204ENST00000526468 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
CAPN1-204ENST00000526468 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
CAPN1-204ENST00000526468 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
CAPN1-204ENST00000526468 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
CAPN1-204ENST00000526468 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
CAPN1-204ENST00000526468 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
CAPN1-204ENST00000526468 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
CAPN1-204ENST00000526468 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CAPN1-204ENST00000526468 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
CAPN1-204ENST00000526468 MT1AP04731 61 aa3.53□□□□□ -1.84
CAPN1-204ENST00000526468 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
CAPN1-204ENST00000526468 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
CAPN1-204ENST00000526468 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
CAPN1-204ENST00000526468 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CAPN1-204ENST00000526468 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
CAPN1-204ENST00000526468 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
CAPN1-204ENST00000526468 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
CAPN1-204ENST00000526468 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CAPN1-204ENST00000526468 MT3P25713 68 aa3.22□□□□□ -1.89
CAPN1-204ENST00000526468 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
CAPN1-204ENST00000526468 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
CAPN1-204ENST00000526468 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CAPN1-204ENST00000526468 PRM1P04553 51 aa2.9□□□□□ -1.95
CAPN1-204ENST00000526468 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
CAPN1-204ENST00000526468 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CAPN1-204ENST00000526468 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
CAPN1-204ENST00000526468 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
CAPN1-204ENST00000526468 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
CAPN1-204ENST00000526468 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
CAPN1-204ENST00000526468 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CAPN1-204ENST00000526468 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CAPN1-204ENST00000526468 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CAPN1-204ENST00000526468 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CAPN1-204ENST00000526468 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CAPN1-204ENST00000526468 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CAPN1-204ENST00000526468 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 87.2 ms