RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
NEDD8-204ENST00000526430 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
NEDD8-204ENST00000526430 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
NEDD8-204ENST00000526430 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
NEDD8-204ENST00000526430 PSPHP1O15172 72 aa4.31□□□□□ -1.72
NEDD8-204ENST00000526430 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
NEDD8-204ENST00000526430 V9GYY9 64 aa4.31□□□□□ -1.72
NEDD8-204ENST00000526430 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
NEDD8-204ENST00000526430 UQCR11O14957 56 aa4.29□□□□□ -1.72
NEDD8-204ENST00000526430 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
NEDD8-204ENST00000526430 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
NEDD8-204ENST00000526430 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
NEDD8-204ENST00000526430 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
NEDD8-204ENST00000526430 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
NEDD8-204ENST00000526430 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
NEDD8-204ENST00000526430 MT4P47944 62 aa4.19□□□□□ -1.74
NEDD8-204ENST00000526430 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
NEDD8-204ENST00000526430 A6NED7 52 aa4.13□□□□□ -1.75
NEDD8-204ENST00000526430 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
NEDD8-204ENST00000526430 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
NEDD8-204ENST00000526430 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
NEDD8-204ENST00000526430 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
NEDD8-204ENST00000526430 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
NEDD8-204ENST00000526430 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
NEDD8-204ENST00000526430 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
NEDD8-204ENST00000526430 TNP1P09430 55 aa4.03□□□□□ -1.76
NEDD8-204ENST00000526430 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
NEDD8-204ENST00000526430 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
NEDD8-204ENST00000526430 K7ERS5 55 aa3.99□□□□□ -1.77
NEDD8-204ENST00000526430 MT1EP04732 61 aa3.99□□□□□ -1.77
NEDD8-204ENST00000526430 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
NEDD8-204ENST00000526430 MT1GP13640 62 aa3.9□□□□□ -1.79
NEDD8-204ENST00000526430 ROMO1P60602 79 aa3.88□□□□□ -1.79
NEDD8-204ENST00000526430 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
NEDD8-204ENST00000526430 MT1LQ93083 61 aa3.87□□□□□ -1.79
NEDD8-204ENST00000526430 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
NEDD8-204ENST00000526430 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
NEDD8-204ENST00000526430 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
NEDD8-204ENST00000526430 MT1MQ8N339 61 aa3.82□□□□□ -1.8
NEDD8-204ENST00000526430 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
NEDD8-204ENST00000526430 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
NEDD8-204ENST00000526430 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
NEDD8-204ENST00000526430 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
NEDD8-204ENST00000526430 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
NEDD8-204ENST00000526430 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
NEDD8-204ENST00000526430 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
NEDD8-204ENST00000526430 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
NEDD8-204ENST00000526430 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
NEDD8-204ENST00000526430 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
NEDD8-204ENST00000526430 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
NEDD8-204ENST00000526430 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
NEDD8-204ENST00000526430 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
NEDD8-204ENST00000526430 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
NEDD8-204ENST00000526430 MT3P25713 68 aa3.38□□□□□ -1.87
NEDD8-204ENST00000526430 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
NEDD8-204ENST00000526430 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
NEDD8-204ENST00000526430 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
NEDD8-204ENST00000526430 MT1AP04731 61 aa3.27□□□□□ -1.89
NEDD8-204ENST00000526430 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
NEDD8-204ENST00000526430 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
NEDD8-204ENST00000526430 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
NEDD8-204ENST00000526430 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
NEDD8-204ENST00000526430 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
NEDD8-204ENST00000526430 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
NEDD8-204ENST00000526430 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
NEDD8-204ENST00000526430 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
NEDD8-204ENST00000526430 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
NEDD8-204ENST00000526430 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
NEDD8-204ENST00000526430 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
NEDD8-204ENST00000526430 PHGR1C9JFL3 82 aa2.55□□□□□ -2
NEDD8-204ENST00000526430 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
NEDD8-204ENST00000526430 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
NEDD8-204ENST00000526430 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
NEDD8-204ENST00000526430 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
NEDD8-204ENST00000526430 INE1O15225 51 aa2.03□□□□□ -2.08
NEDD8-204ENST00000526430 PRM1P04553 51 aa2.02□□□□□ -2.09
NEDD8-204ENST00000526430 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
NEDD8-204ENST00000526430 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms