RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TNP1P09430 55 aa6.73□□□□□ -1.33
CCS-204ENST00000526066 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
CCS-204ENST00000526066 ROMO1P60602 79 aa6.63□□□□□ -1.35
CCS-204ENST00000526066 DSTQ03001 7570 aaKnown RBP6.54□□□□□ -1.36
CCS-204ENST00000526066 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
CCS-204ENST00000526066 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
CCS-204ENST00000526066 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
CCS-204ENST00000526066 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
CCS-204ENST00000526066 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
CCS-204ENST00000526066 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
CCS-204ENST00000526066 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
CCS-204ENST00000526066 MT1EP04732 61 aa6.32□□□□□ -1.4
CCS-204ENST00000526066 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
CCS-204ENST00000526066 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
CCS-204ENST00000526066 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
CCS-204ENST00000526066 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
CCS-204ENST00000526066 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
CCS-204ENST00000526066 MT4P47944 62 aa6.16□□□□□ -1.42
CCS-204ENST00000526066 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
CCS-204ENST00000526066 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
CCS-204ENST00000526066 H3BS24 57 aa6.14□□□□□ -1.43
CCS-204ENST00000526066 MT1LQ93083 61 aa6.13□□□□□ -1.43
CCS-204ENST00000526066 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
CCS-204ENST00000526066 AHNAK2Q8IVF2 5795 aa6.11□□□□□ -1.43
CCS-204ENST00000526066 MT1GP13640 62 aa6.1□□□□□ -1.43
CCS-204ENST00000526066 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
CCS-204ENST00000526066 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
CCS-204ENST00000526066 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
CCS-204ENST00000526066 MT1MQ8N339 61 aa5.98□□□□□ -1.45
CCS-204ENST00000526066 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
CCS-204ENST00000526066 KRTAP5-4Q6L8H1 288 aa5.89□□□□□ -1.47
CCS-204ENST00000526066 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
CCS-204ENST00000526066 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
CCS-204ENST00000526066 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
CCS-204ENST00000526066 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
CCS-204ENST00000526066 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
CCS-204ENST00000526066 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
CCS-204ENST00000526066 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
CCS-204ENST00000526066 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
CCS-204ENST00000526066 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
CCS-204ENST00000526066 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
CCS-204ENST00000526066 KRTAP9-6A8MVA2 160 aa5.47□□□□□ -1.53
CCS-204ENST00000526066 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
CCS-204ENST00000526066 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
CCS-204ENST00000526066 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
CCS-204ENST00000526066 MT1AP04731 61 aa5.24□□□□□ -1.57
CCS-204ENST00000526066 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
CCS-204ENST00000526066 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
CCS-204ENST00000526066 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
CCS-204ENST00000526066 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
CCS-204ENST00000526066 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
CCS-204ENST00000526066 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
CCS-204ENST00000526066 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
CCS-204ENST00000526066 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
CCS-204ENST00000526066 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
CCS-204ENST00000526066 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
CCS-204ENST00000526066 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
CCS-204ENST00000526066 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
CCS-204ENST00000526066 MT3P25713 68 aa4.77□□□□□ -1.65
CCS-204ENST00000526066 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
CCS-204ENST00000526066 INE1O15225 51 aa4.33□□□□□ -1.72
CCS-204ENST00000526066 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CCS-204ENST00000526066 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
CCS-204ENST00000526066 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
CCS-204ENST00000526066 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
CCS-204ENST00000526066 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
CCS-204ENST00000526066 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
CCS-204ENST00000526066 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
CCS-204ENST00000526066 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
CCS-204ENST00000526066 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
CCS-204ENST00000526066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
CCS-204ENST00000526066 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
CCS-204ENST00000526066 PRM1P04553 51 aa3.4□□□□□ -1.87
CCS-204ENST00000526066 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
CCS-204ENST00000526066 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
CCS-204ENST00000526066 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CCS-204ENST00000526066 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
CCS-204ENST00000526066 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms