RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
TSPAN4-216ENST00000526055 MT1GP13640 62 aa6.69□□□□□ -1.34
TSPAN4-216ENST00000526055 DSTQ03001 7570 aaKnown RBP6.68□□□□□ -1.34
TSPAN4-216ENST00000526055 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
TSPAN4-216ENST00000526055 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
TSPAN4-216ENST00000526055 MT1LQ93083 61 aa6.57□□□□□ -1.36
TSPAN4-216ENST00000526055 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
TSPAN4-216ENST00000526055 GPR98Q8WXG9 6306 aa6.55□□□□□ -1.36
TSPAN4-216ENST00000526055 MT1MQ8N339 61 aa6.53□□□□□ -1.36
TSPAN4-216ENST00000526055 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
TSPAN4-216ENST00000526055 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
TSPAN4-216ENST00000526055 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
TSPAN4-216ENST00000526055 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
TSPAN4-216ENST00000526055 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
TSPAN4-216ENST00000526055 ROMO1P60602 79 aa6.34□□□□□ -1.39
TSPAN4-216ENST00000526055 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
TSPAN4-216ENST00000526055 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
TSPAN4-216ENST00000526055 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
TSPAN4-216ENST00000526055 MT4P47944 62 aa6.26□□□□□ -1.41
TSPAN4-216ENST00000526055 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
TSPAN4-216ENST00000526055 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
TSPAN4-216ENST00000526055 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
TSPAN4-216ENST00000526055 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
TSPAN4-216ENST00000526055 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
TSPAN4-216ENST00000526055 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
TSPAN4-216ENST00000526055 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
TSPAN4-216ENST00000526055 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
TSPAN4-216ENST00000526055 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
TSPAN4-216ENST00000526055 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
TSPAN4-216ENST00000526055 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
TSPAN4-216ENST00000526055 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
TSPAN4-216ENST00000526055 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
TSPAN4-216ENST00000526055 KRTAP20-2Q3LI61 65 aa5.87□□□□□ -1.47
TSPAN4-216ENST00000526055 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
TSPAN4-216ENST00000526055 KRTAP5-7Q6L8G8 165 aa5.82□□□□□ -1.48
TSPAN4-216ENST00000526055 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
TSPAN4-216ENST00000526055 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
TSPAN4-216ENST00000526055 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
TSPAN4-216ENST00000526055 MT1AP04731 61 aa5.61□□□□□ -1.51
TSPAN4-216ENST00000526055 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
TSPAN4-216ENST00000526055 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
TSPAN4-216ENST00000526055 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
TSPAN4-216ENST00000526055 KRTAP5-2Q701N4 177 aa5.48□□□□□ -1.53
TSPAN4-216ENST00000526055 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
TSPAN4-216ENST00000526055 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
TSPAN4-216ENST00000526055 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
TSPAN4-216ENST00000526055 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
TSPAN4-216ENST00000526055 KRTAP5-8O75690 187 aa5.17□□□□□ -1.58
TSPAN4-216ENST00000526055 MT3P25713 68 aa5.15□□□□□ -1.59
TSPAN4-216ENST00000526055 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
TSPAN4-216ENST00000526055 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
TSPAN4-216ENST00000526055 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
TSPAN4-216ENST00000526055 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
TSPAN4-216ENST00000526055 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
TSPAN4-216ENST00000526055 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
TSPAN4-216ENST00000526055 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
TSPAN4-216ENST00000526055 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
TSPAN4-216ENST00000526055 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
TSPAN4-216ENST00000526055 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
TSPAN4-216ENST00000526055 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
TSPAN4-216ENST00000526055 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
TSPAN4-216ENST00000526055 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
TSPAN4-216ENST00000526055 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
TSPAN4-216ENST00000526055 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
TSPAN4-216ENST00000526055 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
TSPAN4-216ENST00000526055 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
TSPAN4-216ENST00000526055 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
TSPAN4-216ENST00000526055 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
TSPAN4-216ENST00000526055 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
TSPAN4-216ENST00000526055 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
TSPAN4-216ENST00000526055 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
TSPAN4-216ENST00000526055 INE1O15225 51 aa3.38□□□□□ -1.87
TSPAN4-216ENST00000526055 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
TSPAN4-216ENST00000526055 PRM1P04553 51 aa3.23□□□□□ -1.89
TSPAN4-216ENST00000526055 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
TSPAN4-216ENST00000526055 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
TSPAN4-216ENST00000526055 H3BS24 57 aa2.39□□□□□ -2.03
TSPAN4-216ENST00000526055 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 5.1 ms