RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 TMEM258P61165 79 aa4.47□□□□□ -1.69
CDC27-202ENST00000525495 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
CDC27-202ENST00000525495 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
CDC27-202ENST00000525495 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
CDC27-202ENST00000525495 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
CDC27-202ENST00000525495 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
CDC27-202ENST00000525495 MT1EP04732 61 aa4.42□□□□□ -1.7
CDC27-202ENST00000525495 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
CDC27-202ENST00000525495 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
CDC27-202ENST00000525495 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
CDC27-202ENST00000525495 UQCR11O14957 56 aa4.31□□□□□ -1.72
CDC27-202ENST00000525495 TNP1P09430 55 aa4.3□□□□□ -1.72
CDC27-202ENST00000525495 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
CDC27-202ENST00000525495 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
CDC27-202ENST00000525495 MT1GP13640 62 aa4.24□□□□□ -1.73
CDC27-202ENST00000525495 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
CDC27-202ENST00000525495 MT1LQ93083 61 aa4.24□□□□□ -1.73
CDC27-202ENST00000525495 PSPHP1O15172 72 aa4.21□□□□□ -1.74
CDC27-202ENST00000525495 Q1T7F1 81 aa4.2□□□□□ -1.74
CDC27-202ENST00000525495 MT1MQ8N339 61 aa4.2□□□□□ -1.74
CDC27-202ENST00000525495 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
CDC27-202ENST00000525495 V9GYY9 64 aa4.18□□□□□ -1.74
CDC27-202ENST00000525495 PCP4P48539 62 aa4.14□□□□□ -1.75
CDC27-202ENST00000525495 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
CDC27-202ENST00000525495 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
CDC27-202ENST00000525495 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
CDC27-202ENST00000525495 K7ERS5 55 aa4.1□□□□□ -1.75
CDC27-202ENST00000525495 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
CDC27-202ENST00000525495 A6NED7 52 aa4.05□□□□□ -1.76
CDC27-202ENST00000525495 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CDC27-202ENST00000525495 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
CDC27-202ENST00000525495 MT3P25713 68 aa3.99□□□□□ -1.77
CDC27-202ENST00000525495 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
CDC27-202ENST00000525495 MT4P47944 62 aa3.97□□□□□ -1.77
CDC27-202ENST00000525495 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
CDC27-202ENST00000525495 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CDC27-202ENST00000525495 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
CDC27-202ENST00000525495 ROMO1P60602 79 aa3.86□□□□□ -1.79
CDC27-202ENST00000525495 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
CDC27-202ENST00000525495 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
CDC27-202ENST00000525495 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
CDC27-202ENST00000525495 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
CDC27-202ENST00000525495 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
CDC27-202ENST00000525495 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
CDC27-202ENST00000525495 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
CDC27-202ENST00000525495 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
CDC27-202ENST00000525495 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
CDC27-202ENST00000525495 MT1AP04731 61 aa3.6□□□□□ -1.83
CDC27-202ENST00000525495 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
CDC27-202ENST00000525495 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
CDC27-202ENST00000525495 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
CDC27-202ENST00000525495 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CDC27-202ENST00000525495 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CDC27-202ENST00000525495 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
CDC27-202ENST00000525495 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
CDC27-202ENST00000525495 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
CDC27-202ENST00000525495 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
CDC27-202ENST00000525495 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
CDC27-202ENST00000525495 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
CDC27-202ENST00000525495 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
CDC27-202ENST00000525495 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
CDC27-202ENST00000525495 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
CDC27-202ENST00000525495 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
CDC27-202ENST00000525495 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
CDC27-202ENST00000525495 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CDC27-202ENST00000525495 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
CDC27-202ENST00000525495 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CDC27-202ENST00000525495 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CDC27-202ENST00000525495 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
CDC27-202ENST00000525495 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
CDC27-202ENST00000525495 LUZP6Q538Z0 58 aa2.65□□□□□ -1.98
CDC27-202ENST00000525495 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CDC27-202ENST00000525495 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
CDC27-202ENST00000525495 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
CDC27-202ENST00000525495 PRM1P04553 51 aa2.01□□□□□ -2.09
CDC27-202ENST00000525495 INE1O15225 51 aa1.94□□□□□ -2.1
CDC27-202ENST00000525495 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CDC27-202ENST00000525495 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms