RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
CCS-202ENST00000525435 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
CCS-202ENST00000525435 SPRR2DP22532 72 aa4.52□□□□□ -1.69
CCS-202ENST00000525435 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
CCS-202ENST00000525435 ROMO1P60602 79 aa4.49□□□□□ -1.69
CCS-202ENST00000525435 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
CCS-202ENST00000525435 MT1GP13640 62 aa4.47□□□□□ -1.69
CCS-202ENST00000525435 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
CCS-202ENST00000525435 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
CCS-202ENST00000525435 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
CCS-202ENST00000525435 MT1LQ93083 61 aa4.42□□□□□ -1.7
CCS-202ENST00000525435 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
CCS-202ENST00000525435 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
CCS-202ENST00000525435 MT1MQ8N339 61 aa4.33□□□□□ -1.72
CCS-202ENST00000525435 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
CCS-202ENST00000525435 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
CCS-202ENST00000525435 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
CCS-202ENST00000525435 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
CCS-202ENST00000525435 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
CCS-202ENST00000525435 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
CCS-202ENST00000525435 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
CCS-202ENST00000525435 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
CCS-202ENST00000525435 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
CCS-202ENST00000525435 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
CCS-202ENST00000525435 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
CCS-202ENST00000525435 LCE1DQ5T752 114 aa4□□□□□ -1.77
CCS-202ENST00000525435 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
CCS-202ENST00000525435 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
CCS-202ENST00000525435 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
CCS-202ENST00000525435 MT4P47944 62 aa3.93□□□□□ -1.78
CCS-202ENST00000525435 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
CCS-202ENST00000525435 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
CCS-202ENST00000525435 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CCS-202ENST00000525435 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
CCS-202ENST00000525435 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
CCS-202ENST00000525435 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
CCS-202ENST00000525435 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
CCS-202ENST00000525435 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
CCS-202ENST00000525435 MT1AP04731 61 aa3.78□□□□□ -1.8
CCS-202ENST00000525435 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
CCS-202ENST00000525435 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
CCS-202ENST00000525435 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
CCS-202ENST00000525435 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
CCS-202ENST00000525435 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
CCS-202ENST00000525435 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
CCS-202ENST00000525435 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
CCS-202ENST00000525435 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
CCS-202ENST00000525435 MT3P25713 68 aa3.47□□□□□ -1.85
CCS-202ENST00000525435 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
CCS-202ENST00000525435 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
CCS-202ENST00000525435 H3BS24 57 aa3.32□□□□□ -1.88
CCS-202ENST00000525435 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
CCS-202ENST00000525435 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
CCS-202ENST00000525435 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
CCS-202ENST00000525435 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
CCS-202ENST00000525435 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
CCS-202ENST00000525435 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
CCS-202ENST00000525435 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CCS-202ENST00000525435 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
CCS-202ENST00000525435 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
CCS-202ENST00000525435 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CCS-202ENST00000525435 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
CCS-202ENST00000525435 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CCS-202ENST00000525435 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
CCS-202ENST00000525435 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
CCS-202ENST00000525435 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
CCS-202ENST00000525435 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CCS-202ENST00000525435 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CCS-202ENST00000525435 LCE1FQ5T754 118 aa2.54□□□□□ -2
CCS-202ENST00000525435 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
CCS-202ENST00000525435 INE1O15225 51 aa2.46□□□□□ -2.02
CCS-202ENST00000525435 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CCS-202ENST00000525435 PRM1P04553 51 aa2.27□□□□□ -2.05
CCS-202ENST00000525435 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
CCS-202ENST00000525435 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CCS-202ENST00000525435 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CCS-202ENST00000525435 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CCS-202ENST00000525435 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 15.4 ms