RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
CTSB-209ENST00000525315 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
CTSB-209ENST00000525315 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
CTSB-209ENST00000525315 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
CTSB-209ENST00000525315 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
CTSB-209ENST00000525315 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
CTSB-209ENST00000525315 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
CTSB-209ENST00000525315 MT1GP13640 62 aa4.67□□□□□ -1.66
CTSB-209ENST00000525315 K7ERS5 55 aa4.66□□□□□ -1.66
CTSB-209ENST00000525315 MT1LQ93083 61 aa4.62□□□□□ -1.67
CTSB-209ENST00000525315 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CTSB-209ENST00000525315 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
CTSB-209ENST00000525315 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
CTSB-209ENST00000525315 MT1MQ8N339 61 aa4.56□□□□□ -1.68
CTSB-209ENST00000525315 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
CTSB-209ENST00000525315 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
CTSB-209ENST00000525315 H3BS24 57 aa4.45□□□□□ -1.7
CTSB-209ENST00000525315 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
CTSB-209ENST00000525315 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
CTSB-209ENST00000525315 ROMO1P60602 79 aa4.39□□□□□ -1.71
CTSB-209ENST00000525315 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
CTSB-209ENST00000525315 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
CTSB-209ENST00000525315 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
CTSB-209ENST00000525315 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
CTSB-209ENST00000525315 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CTSB-209ENST00000525315 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
CTSB-209ENST00000525315 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
CTSB-209ENST00000525315 MT4P47944 62 aa4.22□□□□□ -1.73
CTSB-209ENST00000525315 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
CTSB-209ENST00000525315 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
CTSB-209ENST00000525315 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
CTSB-209ENST00000525315 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
CTSB-209ENST00000525315 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
CTSB-209ENST00000525315 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
CTSB-209ENST00000525315 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
CTSB-209ENST00000525315 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
CTSB-209ENST00000525315 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
CTSB-209ENST00000525315 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
CTSB-209ENST00000525315 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CTSB-209ENST00000525315 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
CTSB-209ENST00000525315 MT1AP04731 61 aa3.93□□□□□ -1.78
CTSB-209ENST00000525315 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
CTSB-209ENST00000525315 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
CTSB-209ENST00000525315 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
CTSB-209ENST00000525315 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CTSB-209ENST00000525315 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
CTSB-209ENST00000525315 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
CTSB-209ENST00000525315 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
CTSB-209ENST00000525315 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CTSB-209ENST00000525315 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
CTSB-209ENST00000525315 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
CTSB-209ENST00000525315 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
CTSB-209ENST00000525315 MT3P25713 68 aa3.6□□□□□ -1.83
CTSB-209ENST00000525315 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
CTSB-209ENST00000525315 INE1O15225 51 aa3.51□□□□□ -1.85
CTSB-209ENST00000525315 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
CTSB-209ENST00000525315 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
CTSB-209ENST00000525315 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
CTSB-209ENST00000525315 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
CTSB-209ENST00000525315 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
CTSB-209ENST00000525315 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
CTSB-209ENST00000525315 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
CTSB-209ENST00000525315 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
CTSB-209ENST00000525315 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
CTSB-209ENST00000525315 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CTSB-209ENST00000525315 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CTSB-209ENST00000525315 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
CTSB-209ENST00000525315 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
CTSB-209ENST00000525315 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
CTSB-209ENST00000525315 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
CTSB-209ENST00000525315 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
CTSB-209ENST00000525315 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
CTSB-209ENST00000525315 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
CTSB-209ENST00000525315 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
CTSB-209ENST00000525315 PRM1P04553 51 aa2.26□□□□□ -2.05
CTSB-209ENST00000525315 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CTSB-209ENST00000525315 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
CTSB-209ENST00000525315 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 123.8 ms