RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
PACSIN3-202ENST00000524509 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
PACSIN3-202ENST00000524509 ROMO1P60602 79 aa6.51□□□□□ -1.37
PACSIN3-202ENST00000524509 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
PACSIN3-202ENST00000524509 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
PACSIN3-202ENST00000524509 MT1EP04732 61 aa6.48□□□□□ -1.37
PACSIN3-202ENST00000524509 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
PACSIN3-202ENST00000524509 BRK1Q8WUW1 75 aa6.41□□□□□ -1.38
PACSIN3-202ENST00000524509 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
PACSIN3-202ENST00000524509 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
PACSIN3-202ENST00000524509 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
PACSIN3-202ENST00000524509 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
PACSIN3-202ENST00000524509 MT1GP13640 62 aa6.32□□□□□ -1.4
PACSIN3-202ENST00000524509 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
PACSIN3-202ENST00000524509 MT1LQ93083 61 aa6.26□□□□□ -1.41
PACSIN3-202ENST00000524509 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
PACSIN3-202ENST00000524509 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.41
PACSIN3-202ENST00000524509 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
PACSIN3-202ENST00000524509 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
PACSIN3-202ENST00000524509 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
PACSIN3-202ENST00000524509 MT1MQ8N339 61 aa6.14□□□□□ -1.43
PACSIN3-202ENST00000524509 MT4P47944 62 aa6.12□□□□□ -1.43
PACSIN3-202ENST00000524509 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
PACSIN3-202ENST00000524509 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
PACSIN3-202ENST00000524509 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
PACSIN3-202ENST00000524509 KRTAP5-7Q6L8G8 165 aa5.98□□□□□ -1.45
PACSIN3-202ENST00000524509 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
PACSIN3-202ENST00000524509 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
PACSIN3-202ENST00000524509 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
PACSIN3-202ENST00000524509 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
PACSIN3-202ENST00000524509 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
PACSIN3-202ENST00000524509 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
PACSIN3-202ENST00000524509 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
PACSIN3-202ENST00000524509 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
PACSIN3-202ENST00000524509 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
PACSIN3-202ENST00000524509 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
PACSIN3-202ENST00000524509 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
PACSIN3-202ENST00000524509 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
PACSIN3-202ENST00000524509 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
PACSIN3-202ENST00000524509 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
PACSIN3-202ENST00000524509 MT1AP04731 61 aa5.36□□□□□ -1.55
PACSIN3-202ENST00000524509 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
PACSIN3-202ENST00000524509 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
PACSIN3-202ENST00000524509 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
PACSIN3-202ENST00000524509 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
PACSIN3-202ENST00000524509 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
PACSIN3-202ENST00000524509 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
PACSIN3-202ENST00000524509 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
PACSIN3-202ENST00000524509 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
PACSIN3-202ENST00000524509 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
PACSIN3-202ENST00000524509 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
PACSIN3-202ENST00000524509 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
PACSIN3-202ENST00000524509 MT3P25713 68 aa4.95□□□□□ -1.62
PACSIN3-202ENST00000524509 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
PACSIN3-202ENST00000524509 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
PACSIN3-202ENST00000524509 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
PACSIN3-202ENST00000524509 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
PACSIN3-202ENST00000524509 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
PACSIN3-202ENST00000524509 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
PACSIN3-202ENST00000524509 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
PACSIN3-202ENST00000524509 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
PACSIN3-202ENST00000524509 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
PACSIN3-202ENST00000524509 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
PACSIN3-202ENST00000524509 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
PACSIN3-202ENST00000524509 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
PACSIN3-202ENST00000524509 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
PACSIN3-202ENST00000524509 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
PACSIN3-202ENST00000524509 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
PACSIN3-202ENST00000524509 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
PACSIN3-202ENST00000524509 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
PACSIN3-202ENST00000524509 INE1O15225 51 aa3.59□□□□□ -1.83
PACSIN3-202ENST00000524509 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
PACSIN3-202ENST00000524509 PRM1P04553 51 aa3.29□□□□□ -1.88
PACSIN3-202ENST00000524509 H3BS24 57 aa3.22□□□□□ -1.89
PACSIN3-202ENST00000524509 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
PACSIN3-202ENST00000524509 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
PACSIN3-202ENST00000524509 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
PACSIN3-202ENST00000524509 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms