RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
VPS11-201ENST00000524454 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
VPS11-201ENST00000524454 LCE1FQ5T754 118 aa3□□□□□ -1.93
VPS11-201ENST00000524454 PP632Q6XCG6 107 aa3□□□□□ -1.93
VPS11-201ENST00000524454 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
VPS11-201ENST00000524454 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
VPS11-201ENST00000524454 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
VPS11-201ENST00000524454 TNP1P09430 55 aa2.96□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
VPS11-201ENST00000524454 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
VPS11-201ENST00000524454 MT1XP80297 61 aa2.88□□□□□ -1.95
VPS11-201ENST00000524454 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
VPS11-201ENST00000524454 KMT2DO14686 5537 aa2.81□□□□□ -1.96
VPS11-201ENST00000524454 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
VPS11-201ENST00000524454 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
VPS11-201ENST00000524454 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
VPS11-201ENST00000524454 NEBP20929 6669 aa2.79□□□□□ -1.96
VPS11-201ENST00000524454 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
VPS11-201ENST00000524454 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
VPS11-201ENST00000524454 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
VPS11-201ENST00000524454 SPRR2EP22531 72 aa2.73□□□□□ -1.97
VPS11-201ENST00000524454 SPRR2BP35325 72 aa2.73□□□□□ -1.97
VPS11-201ENST00000524454 SPRR2AP35326 72 aa2.73□□□□□ -1.97
VPS11-201ENST00000524454 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
VPS11-201ENST00000524454 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
VPS11-201ENST00000524454 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
VPS11-201ENST00000524454 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
VPS11-201ENST00000524454 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
VPS11-201ENST00000524454 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
VPS11-201ENST00000524454 SPRR2DP22532 72 aa2.63□□□□□ -1.99
VPS11-201ENST00000524454 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
VPS11-201ENST00000524454 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
VPS11-201ENST00000524454 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
VPS11-201ENST00000524454 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
VPS11-201ENST00000524454 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
VPS11-201ENST00000524454 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
VPS11-201ENST00000524454 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
VPS11-201ENST00000524454 MT1EP04732 61 aa2.54□□□□□ -2
VPS11-201ENST00000524454 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
VPS11-201ENST00000524454 MT1LQ93083 61 aa2.49□□□□□ -2.01
VPS11-201ENST00000524454 MT1GP13640 62 aa2.44□□□□□ -2.02
VPS11-201ENST00000524454 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
VPS11-201ENST00000524454 MT1MQ8N339 61 aa2.42□□□□□ -2.02
VPS11-201ENST00000524454 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
VPS11-201ENST00000524454 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
VPS11-201ENST00000524454 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
VPS11-201ENST00000524454 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
VPS11-201ENST00000524454 MT4P47944 62 aa2.32□□□□□ -2.04
VPS11-201ENST00000524454 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
VPS11-201ENST00000524454 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
VPS11-201ENST00000524454 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
VPS11-201ENST00000524454 INE1O15225 51 aa2.19□□□□□ -2.06
VPS11-201ENST00000524454 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
VPS11-201ENST00000524454 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
VPS11-201ENST00000524454 MT1AP04731 61 aa2.14□□□□□ -2.07
VPS11-201ENST00000524454 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
VPS11-201ENST00000524454 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
VPS11-201ENST00000524454 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
VPS11-201ENST00000524454 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
VPS11-201ENST00000524454 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
VPS11-201ENST00000524454 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
VPS11-201ENST00000524454 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
VPS11-201ENST00000524454 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
VPS11-201ENST00000524454 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
VPS11-201ENST00000524454 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
VPS11-201ENST00000524454 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
VPS11-201ENST00000524454 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
VPS11-201ENST00000524454 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
VPS11-201ENST00000524454 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
VPS11-201ENST00000524454 PRM1P04553 51 aa1.61□□□□□ -2.15
VPS11-201ENST00000524454 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
VPS11-201ENST00000524454 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
VPS11-201ENST00000524454 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
VPS11-201ENST00000524454 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
VPS11-201ENST00000524454 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 85.7 ms