RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
FBXO28-205ENST00000523990 K7ERS5 55 aa6.94□□□□□ -1.3
FBXO28-205ENST00000523990 TNP1P09430 55 aa6.93□□□□□ -1.3
FBXO28-205ENST00000523990 LCE3AQ5TA76 89 aa6.9□□□□□ -1.31
FBXO28-205ENST00000523990 BRK1Q8WUW1 75 aa6.9□□□□□ -1.31
FBXO28-205ENST00000523990 MT1GP13640 62 aa6.88□□□□□ -1.31
FBXO28-205ENST00000523990 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
FBXO28-205ENST00000523990 MT1LQ93083 61 aa6.82□□□□□ -1.32
FBXO28-205ENST00000523990 MT1MQ8N339 61 aa6.79□□□□□ -1.32
FBXO28-205ENST00000523990 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
FBXO28-205ENST00000523990 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
FBXO28-205ENST00000523990 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
FBXO28-205ENST00000523990 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
FBXO28-205ENST00000523990 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
FBXO28-205ENST00000523990 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
FBXO28-205ENST00000523990 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
FBXO28-205ENST00000523990 ROMO1P60602 79 aa6.52□□□□□ -1.37
FBXO28-205ENST00000523990 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
FBXO28-205ENST00000523990 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
FBXO28-205ENST00000523990 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
FBXO28-205ENST00000523990 MT4P47944 62 aa6.45□□□□□ -1.38
FBXO28-205ENST00000523990 KRTAP5-4Q6L8H1 288 aa6.45□□□□□ -1.38
FBXO28-205ENST00000523990 GPR98Q8WXG9 6306 aa6.36□□□□□ -1.39
FBXO28-205ENST00000523990 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
FBXO28-205ENST00000523990 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
FBXO28-205ENST00000523990 KRTAP5-5Q701N2 237 aaPredicted RBP6.25□□□□□ -1.41
FBXO28-205ENST00000523990 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
FBXO28-205ENST00000523990 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
FBXO28-205ENST00000523990 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
FBXO28-205ENST00000523990 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
FBXO28-205ENST00000523990 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.43
FBXO28-205ENST00000523990 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
FBXO28-205ENST00000523990 KRTAP20-2Q3LI61 65 aa6.08□□□□□ -1.44
FBXO28-205ENST00000523990 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
FBXO28-205ENST00000523990 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
FBXO28-205ENST00000523990 KRTAP5-10Q6L8G5 202 aa6.04□□□□□ -1.44
FBXO28-205ENST00000523990 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
FBXO28-205ENST00000523990 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
FBXO28-205ENST00000523990 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
FBXO28-205ENST00000523990 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
FBXO28-205ENST00000523990 MT1AP04731 61 aa5.8□□□□□ -1.48
FBXO28-205ENST00000523990 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
FBXO28-205ENST00000523990 KRTAP5-7Q6L8G8 165 aa5.79□□□□□ -1.48
FBXO28-205ENST00000523990 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
FBXO28-205ENST00000523990 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
FBXO28-205ENST00000523990 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
FBXO28-205ENST00000523990 H3BS24 57 aa5.51□□□□□ -1.53
FBXO28-205ENST00000523990 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
FBXO28-205ENST00000523990 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
FBXO28-205ENST00000523990 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
FBXO28-205ENST00000523990 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
FBXO28-205ENST00000523990 MT3P25713 68 aa5.29□□□□□ -1.56
FBXO28-205ENST00000523990 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
FBXO28-205ENST00000523990 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
FBXO28-205ENST00000523990 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
FBXO28-205ENST00000523990 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
FBXO28-205ENST00000523990 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
FBXO28-205ENST00000523990 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
FBXO28-205ENST00000523990 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
FBXO28-205ENST00000523990 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
FBXO28-205ENST00000523990 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
FBXO28-205ENST00000523990 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
FBXO28-205ENST00000523990 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
FBXO28-205ENST00000523990 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
FBXO28-205ENST00000523990 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.7
FBXO28-205ENST00000523990 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
FBXO28-205ENST00000523990 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
FBXO28-205ENST00000523990 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
FBXO28-205ENST00000523990 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
FBXO28-205ENST00000523990 INE1O15225 51 aa3.97□□□□□ -1.77
FBXO28-205ENST00000523990 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
FBXO28-205ENST00000523990 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
FBXO28-205ENST00000523990 PHGR1C9JFL3 82 aa3.53□□□□□ -1.85
FBXO28-205ENST00000523990 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
FBXO28-205ENST00000523990 PRM1P04553 51 aa3.36□□□□□ -1.87
FBXO28-205ENST00000523990 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
FBXO28-205ENST00000523990 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
FBXO28-205ENST00000523990 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 52.4 ms