RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
R3HCC1-209ENST00000523720 PRR15LQ9BU68 103 aa4.48□□□□□ -1.69
R3HCC1-209ENST00000523720 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
R3HCC1-209ENST00000523720 MT1EP04732 61 aa4.41□□□□□ -1.7
R3HCC1-209ENST00000523720 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
R3HCC1-209ENST00000523720 UQCR11O14957 56 aa4.35□□□□□ -1.71
R3HCC1-209ENST00000523720 PSPHP1O15172 72 aa4.32□□□□□ -1.72
R3HCC1-209ENST00000523720 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
R3HCC1-209ENST00000523720 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
R3HCC1-209ENST00000523720 PCP4P48539 62 aa4.31□□□□□ -1.72
R3HCC1-209ENST00000523720 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
R3HCC1-209ENST00000523720 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
R3HCC1-209ENST00000523720 Q1T7F1 81 aa4.28□□□□□ -1.72
R3HCC1-209ENST00000523720 MT1GP13640 62 aa4.27□□□□□ -1.73
R3HCC1-209ENST00000523720 V9GYY9 64 aa4.27□□□□□ -1.73
R3HCC1-209ENST00000523720 TNP1P09430 55 aa4.26□□□□□ -1.73
R3HCC1-209ENST00000523720 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
R3HCC1-209ENST00000523720 MT1MQ8N339 61 aa4.2□□□□□ -1.74
R3HCC1-209ENST00000523720 MT1LQ93083 61 aa4.2□□□□□ -1.74
R3HCC1-209ENST00000523720 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
R3HCC1-209ENST00000523720 A6NED7 52 aa4.16□□□□□ -1.74
R3HCC1-209ENST00000523720 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
R3HCC1-209ENST00000523720 K7ERS5 55 aa4.14□□□□□ -1.75
R3HCC1-209ENST00000523720 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
R3HCC1-209ENST00000523720 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
R3HCC1-209ENST00000523720 MT4P47944 62 aa4.06□□□□□ -1.76
R3HCC1-209ENST00000523720 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
R3HCC1-209ENST00000523720 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
R3HCC1-209ENST00000523720 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
R3HCC1-209ENST00000523720 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
R3HCC1-209ENST00000523720 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
R3HCC1-209ENST00000523720 ROMO1P60602 79 aa3.92□□□□□ -1.78
R3HCC1-209ENST00000523720 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
R3HCC1-209ENST00000523720 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
R3HCC1-209ENST00000523720 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
R3HCC1-209ENST00000523720 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
R3HCC1-209ENST00000523720 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
R3HCC1-209ENST00000523720 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
R3HCC1-209ENST00000523720 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
R3HCC1-209ENST00000523720 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
R3HCC1-209ENST00000523720 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
R3HCC1-209ENST00000523720 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
R3HCC1-209ENST00000523720 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
R3HCC1-209ENST00000523720 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
R3HCC1-209ENST00000523720 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
R3HCC1-209ENST00000523720 MT1AP04731 61 aa3.59□□□□□ -1.83
R3HCC1-209ENST00000523720 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
R3HCC1-209ENST00000523720 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
R3HCC1-209ENST00000523720 MT3P25713 68 aa3.52□□□□□ -1.85
R3HCC1-209ENST00000523720 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
R3HCC1-209ENST00000523720 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
R3HCC1-209ENST00000523720 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
R3HCC1-209ENST00000523720 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
R3HCC1-209ENST00000523720 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
R3HCC1-209ENST00000523720 PRO0628Q9UI54 55 aa3.32□□□□□ -1.88
R3HCC1-209ENST00000523720 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
R3HCC1-209ENST00000523720 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
R3HCC1-209ENST00000523720 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
R3HCC1-209ENST00000523720 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
R3HCC1-209ENST00000523720 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
R3HCC1-209ENST00000523720 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
R3HCC1-209ENST00000523720 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
R3HCC1-209ENST00000523720 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
R3HCC1-209ENST00000523720 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
R3HCC1-209ENST00000523720 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
R3HCC1-209ENST00000523720 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
R3HCC1-209ENST00000523720 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
R3HCC1-209ENST00000523720 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
R3HCC1-209ENST00000523720 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
R3HCC1-209ENST00000523720 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
R3HCC1-209ENST00000523720 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
R3HCC1-209ENST00000523720 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
R3HCC1-209ENST00000523720 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
R3HCC1-209ENST00000523720 PRM1P04553 51 aa2.05□□□□□ -2.08
R3HCC1-209ENST00000523720 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
R3HCC1-209ENST00000523720 INE1O15225 51 aa1.87□□□□□ -2.11
R3HCC1-209ENST00000523720 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
R3HCC1-209ENST00000523720 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 43.9 ms