RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
PVT1-217ENST00000523190 TNP1P09430 55 aa2.71□□□□□ -1.98
PVT1-217ENST00000523190 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
PVT1-217ENST00000523190 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
PVT1-217ENST00000523190 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
PVT1-217ENST00000523190 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
PVT1-217ENST00000523190 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
PVT1-217ENST00000523190 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
PVT1-217ENST00000523190 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
PVT1-217ENST00000523190 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
PVT1-217ENST00000523190 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
PVT1-217ENST00000523190 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
PVT1-217ENST00000523190 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
PVT1-217ENST00000523190 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
PVT1-217ENST00000523190 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
PVT1-217ENST00000523190 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
PVT1-217ENST00000523190 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
PVT1-217ENST00000523190 KMT2DO14686 5537 aa2.46□□□□□ -2.02
PVT1-217ENST00000523190 MT1EP04732 61 aa2.45□□□□□ -2.02
PVT1-217ENST00000523190 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
PVT1-217ENST00000523190 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
PVT1-217ENST00000523190 NEBP20929 6669 aa2.42□□□□□ -2.02
PVT1-217ENST00000523190 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
PVT1-217ENST00000523190 MT1LQ93083 61 aa2.4□□□□□ -2.03
PVT1-217ENST00000523190 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
PVT1-217ENST00000523190 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
PVT1-217ENST00000523190 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
PVT1-217ENST00000523190 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
PVT1-217ENST00000523190 SPRR2EP22531 72 aa2.33□□□□□ -2.04
PVT1-217ENST00000523190 SPRR2BP35325 72 aa2.33□□□□□ -2.04
PVT1-217ENST00000523190 SPRR2AP35326 72 aa2.33□□□□□ -2.04
PVT1-217ENST00000523190 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
PVT1-217ENST00000523190 MT1GP13640 62 aa2.32□□□□□ -2.04
PVT1-217ENST00000523190 MT1MQ8N339 61 aa2.32□□□□□ -2.04
PVT1-217ENST00000523190 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
PVT1-217ENST00000523190 INE1O15225 51 aa2.28□□□□□ -2.04
PVT1-217ENST00000523190 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
PVT1-217ENST00000523190 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
PVT1-217ENST00000523190 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
PVT1-217ENST00000523190 SPRR2DP22532 72 aa2.24□□□□□ -2.05
PVT1-217ENST00000523190 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
PVT1-217ENST00000523190 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
PVT1-217ENST00000523190 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
PVT1-217ENST00000523190 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
PVT1-217ENST00000523190 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
PVT1-217ENST00000523190 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
PVT1-217ENST00000523190 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
PVT1-217ENST00000523190 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
PVT1-217ENST00000523190 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
PVT1-217ENST00000523190 MT1AP04731 61 aa2.04□□□□□ -2.08
PVT1-217ENST00000523190 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
PVT1-217ENST00000523190 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
PVT1-217ENST00000523190 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
PVT1-217ENST00000523190 MT4P47944 62 aa1.95□□□□□ -2.1
PVT1-217ENST00000523190 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
PVT1-217ENST00000523190 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
PVT1-217ENST00000523190 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PVT1-217ENST00000523190 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
PVT1-217ENST00000523190 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
PVT1-217ENST00000523190 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
PVT1-217ENST00000523190 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
PVT1-217ENST00000523190 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
PVT1-217ENST00000523190 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
PVT1-217ENST00000523190 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
PVT1-217ENST00000523190 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
PVT1-217ENST00000523190 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
PVT1-217ENST00000523190 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
PVT1-217ENST00000523190 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
PVT1-217ENST00000523190 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
PVT1-217ENST00000523190 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
PVT1-217ENST00000523190 PRM1P04553 51 aa1.56□□□□□ -2.16
PVT1-217ENST00000523190 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
PVT1-217ENST00000523190 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
PVT1-217ENST00000523190 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
PVT1-217ENST00000523190 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
PVT1-217ENST00000523190 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
PVT1-217ENST00000523190 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PVT1-217ENST00000523190 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms