RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SPRR2EP22531 72 aa9.31□□□□□ -0.92
NKX2-1-204ENST00000522719 SPRR2BP35325 72 aa9.31□□□□□ -0.92
NKX2-1-204ENST00000522719 SPRR2AP35326 72 aa9.31□□□□□ -0.92
NKX2-1-204ENST00000522719 LCE1AQ5T7P2 110 aa9.31□□□□□ -0.92
NKX2-1-204ENST00000522719 KRTAP19-3Q7Z4W3 81 aa9.21□□□□□ -0.94
NKX2-1-204ENST00000522719 MT1LQ93083 61 aa9.17□□□□□ -0.94
NKX2-1-204ENST00000522719 KTN1-AS1Q86SY8 53 aa9.15□□□□□ -0.94
NKX2-1-204ENST00000522719 PRAC1Q96KF2 57 aa9.13□□□□□ -0.95
NKX2-1-204ENST00000522719 LCE5AQ5TCM9 118 aa9.12□□□□□ -0.95
NKX2-1-204ENST00000522719 MT1GP13640 62 aa9.1□□□□□ -0.95
NKX2-1-204ENST00000522719 KRTAP15-1Q3LI76 137 aa9.09□□□□□ -0.95
NKX2-1-204ENST00000522719 KRTAP2-2Q9BYT5 123 aa9.03□□□□□ -0.96
NKX2-1-204ENST00000522719 KRTAP2-1Q9BYU5 128 aa9.03□□□□□ -0.96
NKX2-1-204ENST00000522719 KRTAP19-4Q3LI73 84 aa9□□□□□ -0.97
NKX2-1-204ENST00000522719 SPRR2DP22532 72 aa8.99□□□□□ -0.97
NKX2-1-204ENST00000522719 MT1MQ8N339 61 aa8.93□□□□□ -0.98
NKX2-1-204ENST00000522719 LCE3CQ5T5A8 94 aa8.75□□□□□ -1.01
NKX2-1-204ENST00000522719 KRTAP4-7Q9BYR0 210 aa8.73□□□□□ -1.01
NKX2-1-204ENST00000522719 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
NKX2-1-204ENST00000522719 GPR98Q8WXG9 6306 aa8.68□□□□□ -1.02
NKX2-1-204ENST00000522719 KRTAP4-3Q9BYR4 195 aa8.65□□□□□ -1.02
NKX2-1-204ENST00000522719 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
NKX2-1-204ENST00000522719 DSTQ03001 7570 aaKnown RBP8.5□□□□□ -1.05
NKX2-1-204ENST00000522719 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
NKX2-1-204ENST00000522719 KRTAP9-6A8MVA2 160 aa8.2□□□□□ -1.1
NKX2-1-204ENST00000522719 SPRR5A0A1B0GTR4 108 aa8.17□□□□□ -1.1
NKX2-1-204ENST00000522719 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
NKX2-1-204ENST00000522719 KRTAP5-5Q701N2 237 aaPredicted RBP8.12□□□□□ -1.11
NKX2-1-204ENST00000522719 LCE4AQ5TA78 99 aa8.03□□□□□ -1.12
NKX2-1-204ENST00000522719 KRTAP5-4Q6L8H1 288 aa8.03□□□□□ -1.12
NKX2-1-204ENST00000522719 LCE1DQ5T752 114 aa7.86□□□□□ -1.15
NKX2-1-204ENST00000522719 MT1AP04731 61 aa7.83□□□□□ -1.16
NKX2-1-204ENST00000522719 MT4P47944 62 aa7.78□□□□□ -1.16
NKX2-1-204ENST00000522719 KRTAP5-10Q6L8G5 202 aa7.77□□□□□ -1.17
NKX2-1-204ENST00000522719 HMCN1Q96RW7 5635 aa7.75□□□□□ -1.17
NKX2-1-204ENST00000522719 KRTAP12-4P60329 112 aa7.71□□□□□ -1.17
NKX2-1-204ENST00000522719 KRTAP6-1Q3LI64 71 aa7.71□□□□□ -1.17
NKX2-1-204ENST00000522719 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
NKX2-1-204ENST00000522719 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
NKX2-1-204ENST00000522719 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
NKX2-1-204ENST00000522719 SYNE1Q8NF91 8797 aaKnown RBP7.61□□□□□ -1.19
NKX2-1-204ENST00000522719 KRTAP5-7Q6L8G8 165 aa7.59□□□□□ -1.19
NKX2-1-204ENST00000522719 KRTAP20-2Q3LI61 65 aa7.52□□□□□ -1.21
NKX2-1-204ENST00000522719 KRTAP9-4Q9BYQ2 154 aa7.48□□□□□ -1.21
NKX2-1-204ENST00000522719 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
NKX2-1-204ENST00000522719 KRTAP6-2Q3LI66 62 aa7.2□□□□□ -1.26
NKX2-1-204ENST00000522719 KRTAP5-2Q701N4 177 aa7.18□□□□□ -1.26
NKX2-1-204ENST00000522719 MT3P25713 68 aa7.14□□□□□ -1.27
NKX2-1-204ENST00000522719 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
NKX2-1-204ENST00000522719 KRTAP4-11Q9BYQ6 195 aa6.66□□□□□ -1.34
NKX2-1-204ENST00000522719 AHNAKQ09666 5890 aaKnown RBP6.6□□□□□ -1.35
NKX2-1-204ENST00000522719 MUC5ACP98088 5654 aa6.59□□□□□ -1.36
NKX2-1-204ENST00000522719 LCE3DQ9BYE3 92 aa6.49□□□□□ -1.37
NKX2-1-204ENST00000522719 MUC5BQ9HC84 5762 aaPredicted RBP6.47□□□□□ -1.37
NKX2-1-204ENST00000522719 OBSCNQ5VST9 7968 aa6.46□□□□□ -1.38
NKX2-1-204ENST00000522719 KRTAP5-8O75690 187 aa6.42□□□□□ -1.38
NKX2-1-204ENST00000522719 LCE1EQ5T753 118 aa6.35□□□□□ -1.39
NKX2-1-204ENST00000522719 KRTAP5-1Q6L8H4 278 aa6.28□□□□□ -1.4
NKX2-1-204ENST00000522719 LCE3EQ5T5B0 92 aa6.25□□□□□ -1.41
NKX2-1-204ENST00000522719 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
NKX2-1-204ENST00000522719 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
NKX2-1-204ENST00000522719 LCE1CQ5T751 118 aa5.9□□□□□ -1.47
NKX2-1-204ENST00000522719 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.47
NKX2-1-204ENST00000522719 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.47
NKX2-1-204ENST00000522719 INE1O15225 51 aa5.8□□□□□ -1.48
NKX2-1-204ENST00000522719 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.48□□□□□ -1.53
NKX2-1-204ENST00000522719 KRTAP5-11Q6L8G4 156 aa5.25□□□□□ -1.57
NKX2-1-204ENST00000522719 PRM1P04553 51 aa5.14□□□□□ -1.59
NKX2-1-204ENST00000522719 KRTAP21-2Q3LI59 83 aa5.08□□□□□ -1.6
NKX2-1-204ENST00000522719 H3BS24 57 aa5.05□□□□□ -1.6
NKX2-1-204ENST00000522719 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
NKX2-1-204ENST00000522719 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
NKX2-1-204ENST00000522719 PHGR1C9JFL3 82 aa4.56□□□□□ -1.68
NKX2-1-204ENST00000522719 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
NKX2-1-204ENST00000522719 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
NKX2-1-204ENST00000522719 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
NKX2-1-204ENST00000522719 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 56.7 ms