RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
TRAPPC9-209ENST00000521167 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
TRAPPC9-209ENST00000521167 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
TRAPPC9-209ENST00000521167 KMT2DO14686 5537 aa4.28□□□□□ -1.72
TRAPPC9-209ENST00000521167 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
TRAPPC9-209ENST00000521167 A0A0D9SG42 100 aa4.22□□□□□ -1.73
TRAPPC9-209ENST00000521167 K7ERS5 55 aa4.21□□□□□ -1.74
TRAPPC9-209ENST00000521167 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
TRAPPC9-209ENST00000521167 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
TRAPPC9-209ENST00000521167 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
TRAPPC9-209ENST00000521167 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
TRAPPC9-209ENST00000521167 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
TRAPPC9-209ENST00000521167 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
TRAPPC9-209ENST00000521167 SPRR2EP22531 72 aa4.13□□□□□ -1.75
TRAPPC9-209ENST00000521167 SPRR2BP35325 72 aa4.13□□□□□ -1.75
TRAPPC9-209ENST00000521167 SPRR2AP35326 72 aa4.13□□□□□ -1.75
TRAPPC9-209ENST00000521167 ROMO1P60602 79 aa4.13□□□□□ -1.75
TRAPPC9-209ENST00000521167 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
TRAPPC9-209ENST00000521167 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
TRAPPC9-209ENST00000521167 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
TRAPPC9-209ENST00000521167 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
TRAPPC9-209ENST00000521167 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
TRAPPC9-209ENST00000521167 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
TRAPPC9-209ENST00000521167 SPRR2DP22532 72 aa4□□□□□ -1.77
TRAPPC9-209ENST00000521167 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
TRAPPC9-209ENST00000521167 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
TRAPPC9-209ENST00000521167 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
TRAPPC9-209ENST00000521167 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
TRAPPC9-209ENST00000521167 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
TRAPPC9-209ENST00000521167 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
TRAPPC9-209ENST00000521167 MT1EP04732 61 aa3.86□□□□□ -1.79
TRAPPC9-209ENST00000521167 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
TRAPPC9-209ENST00000521167 TNP1P09430 55 aa3.81□□□□□ -1.8
TRAPPC9-209ENST00000521167 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
TRAPPC9-209ENST00000521167 MT1GP13640 62 aa3.78□□□□□ -1.8
TRAPPC9-209ENST00000521167 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
TRAPPC9-209ENST00000521167 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
TRAPPC9-209ENST00000521167 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
TRAPPC9-209ENST00000521167 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
TRAPPC9-209ENST00000521167 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
TRAPPC9-209ENST00000521167 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
TRAPPC9-209ENST00000521167 MT1LQ93083 61 aa3.7□□□□□ -1.82
TRAPPC9-209ENST00000521167 MT1MQ8N339 61 aa3.68□□□□□ -1.82
TRAPPC9-209ENST00000521167 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
TRAPPC9-209ENST00000521167 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
TRAPPC9-209ENST00000521167 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
TRAPPC9-209ENST00000521167 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
TRAPPC9-209ENST00000521167 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
TRAPPC9-209ENST00000521167 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
TRAPPC9-209ENST00000521167 MT4P47944 62 aa3.48□□□□□ -1.85
TRAPPC9-209ENST00000521167 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
TRAPPC9-209ENST00000521167 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
TRAPPC9-209ENST00000521167 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC9-209ENST00000521167 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
TRAPPC9-209ENST00000521167 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
TRAPPC9-209ENST00000521167 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
TRAPPC9-209ENST00000521167 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
TRAPPC9-209ENST00000521167 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
TRAPPC9-209ENST00000521167 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
TRAPPC9-209ENST00000521167 MT1AP04731 61 aa3.16□□□□□ -1.9
TRAPPC9-209ENST00000521167 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
TRAPPC9-209ENST00000521167 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
TRAPPC9-209ENST00000521167 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
TRAPPC9-209ENST00000521167 INE1O15225 51 aa3.01□□□□□ -1.93
TRAPPC9-209ENST00000521167 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
TRAPPC9-209ENST00000521167 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
TRAPPC9-209ENST00000521167 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
TRAPPC9-209ENST00000521167 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
TRAPPC9-209ENST00000521167 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC9-209ENST00000521167 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
TRAPPC9-209ENST00000521167 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
TRAPPC9-209ENST00000521167 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
TRAPPC9-209ENST00000521167 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
TRAPPC9-209ENST00000521167 PRM1P04553 51 aa2.14□□□□□ -2.07
TRAPPC9-209ENST00000521167 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
TRAPPC9-209ENST00000521167 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
TRAPPC9-209ENST00000521167 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TRAPPC9-209ENST00000521167 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms