RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CASC2Q6XLA1 102 aa1.82□□□□□ -2.12
VPS13B-208ENST00000521037 A0A087WSZ3 146 aa1.81□□□□□ -2.12
VPS13B-208ENST00000521037 C9orf92A6NGG3 77 aa1.81□□□□□ -2.12
VPS13B-208ENST00000521037 MT1BP07438 61 aa1.81□□□□□ -2.12
VPS13B-208ENST00000521037 LINC01554Q52M75 96 aa1.81□□□□□ -2.12
VPS13B-208ENST00000521037 KTN1-AS1Q86SY8 53 aa1.81□□□□□ -2.12
VPS13B-208ENST00000521037 LINC00472Q9H8W2 130 aa1.81□□□□□ -2.12
VPS13B-208ENST00000521037 CHKB-CPT1BH3BT56 60 aa1.8□□□□□ -2.12
VPS13B-208ENST00000521037 PRLHP81277 87 aa1.8□□□□□ -2.12
VPS13B-208ENST00000521037 Q5VV11 94 aa1.8□□□□□ -2.12
VPS13B-208ENST00000521037 PP632Q6XCG6 107 aa1.8□□□□□ -2.12
VPS13B-208ENST00000521037 WFDC13Q8IUB5 93 aa1.8□□□□□ -2.12
VPS13B-208ENST00000521037 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
VPS13B-208ENST00000521037 PRR15LQ9BU68 103 aa1.79□□□□□ -2.12
VPS13B-208ENST00000521037 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
VPS13B-208ENST00000521037 LINC01558Q9Y6Z2 57 aa1.79□□□□□ -2.12
VPS13B-208ENST00000521037 MMP24-AS1A0A0U1RRL7 71 aa1.78□□□□□ -2.12
VPS13B-208ENST00000521037 SPRR2DP22532 72 aa1.78□□□□□ -2.12
VPS13B-208ENST00000521037 COA5Q86WW8 74 aa1.78□□□□□ -2.12
VPS13B-208ENST00000521037 A6NN06 94 aa1.76□□□□□ -2.13
VPS13B-208ENST00000521037 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
VPS13B-208ENST00000521037 MRPL34Q9BQ48 92 aaKnown RBP1.76□□□□□ -2.13
VPS13B-208ENST00000521037 ACYP2P14621 99 aa1.75□□□□□ -2.13
VPS13B-208ENST00000521037 SPTSSBQ8NFR3 76 aa1.75□□□□□ -2.13
VPS13B-208ENST00000521037 Q96NJ1 140 aa1.75□□□□□ -2.13
VPS13B-208ENST00000521037 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
VPS13B-208ENST00000521037 SPRR5A0A1B0GTR4 108 aa1.73□□□□□ -2.13
VPS13B-208ENST00000521037 SSBP3-AS1Q7Z2R9 100 aa1.73□□□□□ -2.13
VPS13B-208ENST00000521037 A0A0G2JQZ4 141 aa1.72□□□□□ -2.13
VPS13B-208ENST00000521037 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
VPS13B-208ENST00000521037 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
VPS13B-208ENST00000521037 KRTAP19-8Q3LI54 63 aa1.71□□□□□ -2.14
VPS13B-208ENST00000521037 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
VPS13B-208ENST00000521037 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
VPS13B-208ENST00000521037 A0A1B0GU69 56 aa1.7□□□□□ -2.14
VPS13B-208ENST00000521037 UQCR11O14957 56 aa1.7□□□□□ -2.14
VPS13B-208ENST00000521037 SPINK7P58062 85 aa1.7□□□□□ -2.14
VPS13B-208ENST00000521037 MIR22HGQ0VDD5 57 aa1.68□□□□□ -2.14
VPS13B-208ENST00000521037 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
VPS13B-208ENST00000521037 P0C880 135 aa1.66□□□□□ -2.14
VPS13B-208ENST00000521037 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
VPS13B-208ENST00000521037 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
VPS13B-208ENST00000521037 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
VPS13B-208ENST00000521037 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
VPS13B-208ENST00000521037 ROMO1P60602 79 aa1.62□□□□□ -2.15
VPS13B-208ENST00000521037 MT4P47944 62 aa1.61□□□□□ -2.15
VPS13B-208ENST00000521037 MT1XP80297 61 aa1.59□□□□□ -2.15
VPS13B-208ENST00000521037 CSAG1Q6PB30 78 aa1.59□□□□□ -2.15
VPS13B-208ENST00000521037 H1FX-AS1Q4G0G2 97 aa1.58□□□□□ -2.16
VPS13B-208ENST00000521037 H0YAA0 97 aa1.57□□□□□ -2.16
VPS13B-208ENST00000521037 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
VPS13B-208ENST00000521037 M0QZ58 72 aa1.49□□□□□ -2.17
VPS13B-208ENST00000521037 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
VPS13B-208ENST00000521037 KRTAP13-4Q3LI77 160 aa1.48□□□□□ -2.17
VPS13B-208ENST00000521037 S4R3F8 94 aa1.48□□□□□ -2.17
VPS13B-208ENST00000521037 KRTAP19-7Q3SYF9 63 aa1.45□□□□□ -2.18
VPS13B-208ENST00000521037 A0A0D9SG42 100 aa1.44□□□□□ -2.18
VPS13B-208ENST00000521037 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
VPS13B-208ENST00000521037 INE1O15225 51 aa1.43□□□□□ -2.18
VPS13B-208ENST00000521037 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
VPS13B-208ENST00000521037 MT1EP04732 61 aa1.41□□□□□ -2.18
VPS13B-208ENST00000521037 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
VPS13B-208ENST00000521037 C10orf95Q9H7T3 257 aa1.38□□□□□ -2.19
VPS13B-208ENST00000521037 PLAC4Q8WY50 150 aa1.37□□□□□ -2.19
VPS13B-208ENST00000521037 MT1MQ8N339 61 aa1.36□□□□□ -2.19
VPS13B-208ENST00000521037 MT1GP13640 62 aa1.34□□□□□ -2.19
VPS13B-208ENST00000521037 TNP1P09430 55 aa1.31□□□□□ -2.2
VPS13B-208ENST00000521037 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
VPS13B-208ENST00000521037 MT1LQ93083 61 aa1.28□□□□□ -2.2
VPS13B-208ENST00000521037 KRTAP12-4P60329 112 aa1.23□□□□□ -2.21
VPS13B-208ENST00000521037 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
VPS13B-208ENST00000521037 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
VPS13B-208ENST00000521037 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
VPS13B-208ENST00000521037 MT1AP04731 61 aa1.06□□□□□ -2.24
VPS13B-208ENST00000521037 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
VPS13B-208ENST00000521037 PRM1P04553 51 aa0.79□□□□□ -2.28
VPS13B-208ENST00000521037 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
VPS13B-208ENST00000521037 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms