RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 SPRR2BP35325 72 aa4.69□□□□□ -1.66
CLK4-208ENST00000520957 SPRR2AP35326 72 aa4.69□□□□□ -1.66
CLK4-208ENST00000520957 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
CLK4-208ENST00000520957 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
CLK4-208ENST00000520957 TNP1P09430 55 aa4.65□□□□□ -1.66
CLK4-208ENST00000520957 K7ERS5 55 aa4.61□□□□□ -1.67
CLK4-208ENST00000520957 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
CLK4-208ENST00000520957 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
CLK4-208ENST00000520957 MT1EP04732 61 aa4.58□□□□□ -1.68
CLK4-208ENST00000520957 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
CLK4-208ENST00000520957 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
CLK4-208ENST00000520957 SPRR2DP22532 72 aa4.52□□□□□ -1.69
CLK4-208ENST00000520957 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
CLK4-208ENST00000520957 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
CLK4-208ENST00000520957 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
CLK4-208ENST00000520957 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
CLK4-208ENST00000520957 MT1LQ93083 61 aa4.42□□□□□ -1.7
CLK4-208ENST00000520957 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
CLK4-208ENST00000520957 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
CLK4-208ENST00000520957 ROMO1P60602 79 aa4.41□□□□□ -1.7
CLK4-208ENST00000520957 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
CLK4-208ENST00000520957 MT1GP13640 62 aa4.38□□□□□ -1.71
CLK4-208ENST00000520957 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
CLK4-208ENST00000520957 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
CLK4-208ENST00000520957 MT1MQ8N339 61 aa4.35□□□□□ -1.71
CLK4-208ENST00000520957 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
CLK4-208ENST00000520957 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
CLK4-208ENST00000520957 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
CLK4-208ENST00000520957 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
CLK4-208ENST00000520957 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CLK4-208ENST00000520957 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
CLK4-208ENST00000520957 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
CLK4-208ENST00000520957 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
CLK4-208ENST00000520957 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
CLK4-208ENST00000520957 MT4P47944 62 aa3.97□□□□□ -1.77
CLK4-208ENST00000520957 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
CLK4-208ENST00000520957 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
CLK4-208ENST00000520957 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CLK4-208ENST00000520957 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
CLK4-208ENST00000520957 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
CLK4-208ENST00000520957 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
CLK4-208ENST00000520957 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
CLK4-208ENST00000520957 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
CLK4-208ENST00000520957 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
CLK4-208ENST00000520957 MT1AP04731 61 aa3.74□□□□□ -1.81
CLK4-208ENST00000520957 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
CLK4-208ENST00000520957 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
CLK4-208ENST00000520957 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
CLK4-208ENST00000520957 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
CLK4-208ENST00000520957 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
CLK4-208ENST00000520957 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
CLK4-208ENST00000520957 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
CLK4-208ENST00000520957 MT3P25713 68 aa3.4□□□□□ -1.86
CLK4-208ENST00000520957 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
CLK4-208ENST00000520957 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
CLK4-208ENST00000520957 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
CLK4-208ENST00000520957 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
CLK4-208ENST00000520957 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CLK4-208ENST00000520957 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CLK4-208ENST00000520957 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.9
CLK4-208ENST00000520957 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CLK4-208ENST00000520957 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
CLK4-208ENST00000520957 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
CLK4-208ENST00000520957 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CLK4-208ENST00000520957 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
CLK4-208ENST00000520957 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CLK4-208ENST00000520957 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CLK4-208ENST00000520957 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CLK4-208ENST00000520957 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
CLK4-208ENST00000520957 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
CLK4-208ENST00000520957 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CLK4-208ENST00000520957 PRM1P04553 51 aa2.29□□□□□ -2.04
CLK4-208ENST00000520957 INE1O15225 51 aa2.23□□□□□ -2.05
CLK4-208ENST00000520957 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
CLK4-208ENST00000520957 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CLK4-208ENST00000520957 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CLK4-208ENST00000520957 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 27.5 ms