RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	MTOR	P42345	2549 aa		0.34	□□□□□ -2.36
EFCAB13-208	ENST00000520776	DNAH10	Q8IVF4	4471 aa		0.34	□□□□□ -2.36
EFCAB13-208	ENST00000520776	HECTD4	Q9Y4D8	3996 aa		0.34	□□□□□ -2.36
EFCAB13-208	ENST00000520776	EYS	Q5T1H1	3165 aa		0.34	□□□□□ -2.36
EFCAB13-208	ENST00000520776	HSPG2	P98160	4391 aa		0.34	□□□□□ -2.36
EFCAB13-208	ENST00000520776	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	DNAH9	Q9NYC9	4486 aa		0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	CMYA5	Q8N3K9	4069 aa		0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	MYO9A	B2RTY4	2548 aa		0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	APOB	P04114	4563 aa	Known RBP	0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	KRTAP20-1	Q3LI63	56 aa		0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	PKD1	P98161	4303 aa		0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	FLG	P20930	4061 aa	Predicted RBP	0.33	□□□□□ -2.36
EFCAB13-208	ENST00000520776	FLNA	P21333	2647 aa	Known RBP	0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	IGSF10	Q6WRI0	2623 aa		0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	STAB2	Q8WWQ8	2551 aa		0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	SMR3B	P02814	79 aa	Predicted RBP	0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	FAT3	Q8TDW7	4589 aa		0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	DNAH6	Q9C0G6	4158 aa		0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	TNXB	P22105	4242 aa		0.32	□□□□□ -2.36
EFCAB13-208	ENST00000520776	CEP295	Q9C0D2	2601 aa		0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	SYNE1	Q8NF91	8797 aa	Known RBP	0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	MGAM2	Q2M2H8	2515 aa		0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	KRTAP19-5	Q3LI72	72 aa		0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	SPRR2G	Q9BYE4	73 aa		0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	RYR2	Q92736	4967 aa		0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.31	□□□□□ -2.36
EFCAB13-208	ENST00000520776	STARD9	Q9P2P6	4700 aa		0.3	□□□□□ -2.36
EFCAB13-208	ENST00000520776	LRP1	Q07954	4544 aa	Known RBP	0.3	□□□□□ -2.36
EFCAB13-208	ENST00000520776	PLEC	Q15149	4684 aa	Known RBP	0.3	□□□□□ -2.36
EFCAB13-208	ENST00000520776	MT1A	P04731	61 aa		0.3	□□□□□ -2.36
EFCAB13-208	ENST00000520776	PKHD1	P08F94	4074 aa		0.3	□□□□□ -2.36
EFCAB13-208	ENST00000520776	FAT4	Q6V0I7	4981 aa		0.3	□□□□□ -2.36
EFCAB13-208	ENST00000520776	RYR1	P21817	5038 aa		0.29	□□□□□ -2.36
EFCAB13-208	ENST00000520776	DNAH5	Q8TE73	4624 aa		0.29	□□□□□ -2.36
EFCAB13-208	ENST00000520776	PRM1	P04553	51 aa		0.29	□□□□□ -2.36
EFCAB13-208	ENST00000520776	LPA	P08519	4548 aa		0.29	□□□□□ -2.36
EFCAB13-208	ENST00000520776	DYNC1H1	Q14204	4646 aa	Known RBP	0.28	□□□□□ -2.36
EFCAB13-208	ENST00000520776	LRP1B	Q9NZR2	4599 aa		0.28	□□□□□ -2.36
EFCAB13-208	ENST00000520776	MUC17	Q685J3	4493 aa		0.28	□□□□□ -2.36
EFCAB13-208	ENST00000520776	MT1E	P04732	61 aa		0.28	□□□□□ -2.36
EFCAB13-208	ENST00000520776	UBR4	Q5T4S7	5183 aa		0.28	□□□□□ -2.37
EFCAB13-208	ENST00000520776	KRTAP19-2	Q3LHN2	52 aa		0.27	□□□□□ -2.37
EFCAB13-208	ENST00000520776	KRTAP19-8	Q3LI54	63 aa		0.27	□□□□□ -2.37
EFCAB13-208	ENST00000520776	FAT1	Q14517	4588 aa		0.27	□□□□□ -2.37
EFCAB13-208	ENST00000520776	SPRR2B	P35325	72 aa		0.26	□□□□□ -2.37
EFCAB13-208	ENST00000520776	SPRR2A	P35326	72 aa		0.26	□□□□□ -2.37
EFCAB13-208	ENST00000520776	MT1X	P80297	61 aa		0.26	□□□□□ -2.37
EFCAB13-208	ENST00000520776	MT1L	Q93083	61 aa		0.26	□□□□□ -2.37
EFCAB13-208	ENST00000520776	SPRR2D	P22532	72 aa		0.26	□□□□□ -2.37
EFCAB13-208	ENST00000520776	SPRR2F	Q96RM1	72 aa		0.26	□□□□□ -2.37
EFCAB13-208	ENST00000520776	KRTAP6-2	Q3LI66	62 aa		0.25	□□□□□ -2.37
EFCAB13-208	ENST00000520776	SPRR2E	P22531	72 aa		0.25	□□□□□ -2.37
EFCAB13-208	ENST00000520776	MT1H	P80294	61 aa		0.25	□□□□□ -2.37
EFCAB13-208	ENST00000520776	HERC1	Q15751	4861 aa		0.24	□□□□□ -2.37
EFCAB13-208	ENST00000520776	RYR3	Q15413	4870 aa		0.24	□□□□□ -2.37
EFCAB13-208	ENST00000520776	MT1B	P07438	61 aa		0.24	□□□□□ -2.37
EFCAB13-208	ENST00000520776	MT1HL1	P0DM35	61 aa		0.24	□□□□□ -2.37
EFCAB13-208	ENST00000520776	KRTAP19-7	Q3SYF9	63 aa		0.24	□□□□□ -2.37
EFCAB13-208	ENST00000520776	LRP2	P98164	4655 aa		0.24	□□□□□ -2.37
EFCAB13-208	ENST00000520776	DNHD1	Q96M86	4753 aa		0.22	□□□□□ -2.37
EFCAB13-208	ENST00000520776	HMCN2	Q8NDA2	5059 aa		0.22	□□□□□ -2.37
EFCAB13-208	ENST00000520776	MT2A	P02795	61 aa		0.21	□□□□□ -2.38
EFCAB13-208	ENST00000520776	MT1G	P13640	62 aa		0.21	□□□□□ -2.38
EFCAB13-208	ENST00000520776	MUC12	Q9UKN1	5478 aa		0.21	□□□□□ -2.38
EFCAB13-208	ENST00000520776	MT1F	P04733	61 aa		0.21	□□□□□ -2.38
EFCAB13-208	ENST00000520776	MT1M	Q8N339	61 aa		0.21	□□□□□ -2.38
EFCAB13-208	ENST00000520776	KRTAP6-1	Q3LI64	71 aa		0.19	□□□□□ -2.38
EFCAB13-208	ENST00000520776	HYDIN	Q4G0P3	5121 aa		0.18	□□□□□ -2.38
EFCAB13-208	ENST00000520776	HERC2	O95714	4834 aa		0.18	□□□□□ -2.38
EFCAB13-208	ENST00000520776	BIRC6	Q9NR09	4857 aa		0.18	□□□□□ -2.38
EFCAB13-208	ENST00000520776	USH2A	O75445	5202 aa		0.16	□□□□□ -2.38
EFCAB13-208	ENST00000520776	RNF213	Q63HN8	5207 aa		0.15	□□□□□ -2.38
EFCAB13-208	ENST00000520776	EPPK1	P58107	5090 aa	Known RBP	0.14	□□□□□ -2.39
EFCAB13-208	ENST00000520776	ABCA13	Q86UQ4	5058 aa		0.13	□□□□□ -2.39
EFCAB13-208	ENST00000520776	KRTAP19-6	Q3LI70	58 aa		0.13	□□□□□ -2.39
EFCAB13-208	ENST00000520776	KRTAP20-2	Q3LI61	65 aa		0.08	□□□□□ -2.4
EFCAB13-208	ENST00000520776	MT4	P47944	62 aa		0.07	□□□□□ -2.4

Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms