RNA–Protein interactions for RNA: ENST00000520381.5

ARFGEF1-207, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 5,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-207ENST00000520381 MT3P25713 68 aa1.83□□□□□ -2.12
ARFGEF1-207ENST00000520381 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
ARFGEF1-207ENST00000520381 HMCN2Q8NDA2 5059 aa1.81□□□□□ -2.12
ARFGEF1-207ENST00000520381 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
ARFGEF1-207ENST00000520381 USH2AO75445 5202 aa1.79□□□□□ -2.12
ARFGEF1-207ENST00000520381 KRTAP10-5P60370 271 aa1.79□□□□□ -2.12
ARFGEF1-207ENST00000520381 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.12
ARFGEF1-207ENST00000520381 TNXBP22105 4242 aa1.78□□□□□ -2.12
ARFGEF1-207ENST00000520381 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
ARFGEF1-207ENST00000520381 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
ARFGEF1-207ENST00000520381 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
ARFGEF1-207ENST00000520381 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
ARFGEF1-207ENST00000520381 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
ARFGEF1-207ENST00000520381 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
ARFGEF1-207ENST00000520381 NEBP20929 6669 aa1.72□□□□□ -2.13
ARFGEF1-207ENST00000520381 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
ARFGEF1-207ENST00000520381 KRTAP2-2Q9BYT5 123 aa1.7□□□□□ -2.14
ARFGEF1-207ENST00000520381 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
ARFGEF1-207ENST00000520381 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
ARFGEF1-207ENST00000520381 MT1HP80294 61 aa1.68□□□□□ -2.14
ARFGEF1-207ENST00000520381 LCE3CQ5T5A8 94 aa1.67□□□□□ -2.14
ARFGEF1-207ENST00000520381 KMT2DO14686 5537 aa1.67□□□□□ -2.14
ARFGEF1-207ENST00000520381 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
ARFGEF1-207ENST00000520381 MT2AP02795 61 aa1.6□□□□□ -2.15
ARFGEF1-207ENST00000520381 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
ARFGEF1-207ENST00000520381 MT4P47944 62 aa1.6□□□□□ -2.15
ARFGEF1-207ENST00000520381 MT1FP04733 61 aa1.59□□□□□ -2.15
ARFGEF1-207ENST00000520381 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
ARFGEF1-207ENST00000520381 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
ARFGEF1-207ENST00000520381 LCE1AQ5T7P2 110 aa1.57□□□□□ -2.16
ARFGEF1-207ENST00000520381 LCE1FQ5T754 118 aa1.56□□□□□ -2.16
ARFGEF1-207ENST00000520381 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
ARFGEF1-207ENST00000520381 SYNE2Q8WXH0 6885 aaKnown RBP1.56□□□□□ -2.16
ARFGEF1-207ENST00000520381 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
ARFGEF1-207ENST00000520381 LCE3EQ5T5B0 92 aa1.54□□□□□ -2.16
ARFGEF1-207ENST00000520381 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.16
ARFGEF1-207ENST00000520381 FLGP20930 4061 aaPredicted RBP1.53□□□□□ -2.16
ARFGEF1-207ENST00000520381 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
ARFGEF1-207ENST00000520381 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
ARFGEF1-207ENST00000520381 PRM1P04553 51 aa1.5□□□□□ -2.17
ARFGEF1-207ENST00000520381 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
ARFGEF1-207ENST00000520381 KRTAP5-9P26371 169 aa1.49□□□□□ -2.17
ARFGEF1-207ENST00000520381 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
ARFGEF1-207ENST00000520381 MT1XP80297 61 aa1.48□□□□□ -2.17
ARFGEF1-207ENST00000520381 KRTAP19-8Q3LI54 63 aa1.48□□□□□ -2.17
ARFGEF1-207ENST00000520381 MT1BP07438 61 aa1.46□□□□□ -2.18
ARFGEF1-207ENST00000520381 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
ARFGEF1-207ENST00000520381 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
ARFGEF1-207ENST00000520381 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
ARFGEF1-207ENST00000520381 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
ARFGEF1-207ENST00000520381 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
ARFGEF1-207ENST00000520381 MT1LQ93083 61 aa1.39□□□□□ -2.19
ARFGEF1-207ENST00000520381 MT1GP13640 62 aa1.38□□□□□ -2.19
ARFGEF1-207ENST00000520381 MACF1Q9UPN3 7388 aaKnown RBP1.37□□□□□ -2.19
ARFGEF1-207ENST00000520381 KRTAP9-6A8MVA2 160 aa1.33□□□□□ -2.2
ARFGEF1-207ENST00000520381 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
ARFGEF1-207ENST00000520381 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
ARFGEF1-207ENST00000520381 MT1EP04732 61 aa1.31□□□□□ -2.2
ARFGEF1-207ENST00000520381 KRTAP19-3Q7Z4W3 81 aa1.29□□□□□ -2.2
ARFGEF1-207ENST00000520381 LCE1BQ5T7P3 118 aa1.29□□□□□ -2.2
ARFGEF1-207ENST00000520381 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.2
ARFGEF1-207ENST00000520381 MT1AP04731 61 aa1.27□□□□□ -2.21
ARFGEF1-207ENST00000520381 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
ARFGEF1-207ENST00000520381 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
ARFGEF1-207ENST00000520381 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
ARFGEF1-207ENST00000520381 MT1MQ8N339 61 aa1.26□□□□□ -2.21
ARFGEF1-207ENST00000520381 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
ARFGEF1-207ENST00000520381 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
ARFGEF1-207ENST00000520381 KRTAP5-4Q6L8H1 288 aa1.18□□□□□ -2.22
ARFGEF1-207ENST00000520381 KRTAP5-5Q701N2 237 aaPredicted RBP1.17□□□□□ -2.22
ARFGEF1-207ENST00000520381 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
ARFGEF1-207ENST00000520381 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
ARFGEF1-207ENST00000520381 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
ARFGEF1-207ENST00000520381 KRTAP5-8O75690 187 aa1.06□□□□□ -2.24
ARFGEF1-207ENST00000520381 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
ARFGEF1-207ENST00000520381 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
ARFGEF1-207ENST00000520381 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
ARFGEF1-207ENST00000520381 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms