RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
PABPC1-214ENST00000520142 ROMO1P60602 79 aa4.43□□□□□ -1.7
PABPC1-214ENST00000520142 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
PABPC1-214ENST00000520142 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
PABPC1-214ENST00000520142 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
PABPC1-214ENST00000520142 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
PABPC1-214ENST00000520142 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
PABPC1-214ENST00000520142 TNP1P09430 55 aa4.4□□□□□ -1.71
PABPC1-214ENST00000520142 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
PABPC1-214ENST00000520142 KRTAP25-1Q3LHN0 102 aa4.38□□□□□ -1.71
PABPC1-214ENST00000520142 SPRR2EP22531 72 aa4.37□□□□□ -1.71
PABPC1-214ENST00000520142 SPRR2BP35325 72 aa4.37□□□□□ -1.71
PABPC1-214ENST00000520142 SPRR2AP35326 72 aa4.37□□□□□ -1.71
PABPC1-214ENST00000520142 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
PABPC1-214ENST00000520142 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
PABPC1-214ENST00000520142 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
PABPC1-214ENST00000520142 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
PABPC1-214ENST00000520142 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
PABPC1-214ENST00000520142 SPRR2DP22532 72 aa4.23□□□□□ -1.73
PABPC1-214ENST00000520142 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
PABPC1-214ENST00000520142 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
PABPC1-214ENST00000520142 MT1EP04732 61 aa4.14□□□□□ -1.75
PABPC1-214ENST00000520142 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
PABPC1-214ENST00000520142 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
PABPC1-214ENST00000520142 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
PABPC1-214ENST00000520142 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
PABPC1-214ENST00000520142 MT1GP13640 62 aa4□□□□□ -1.77
PABPC1-214ENST00000520142 KRTAP12-3P60328 96 aa4□□□□□ -1.77
PABPC1-214ENST00000520142 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
PABPC1-214ENST00000520142 MT1LQ93083 61 aa3.97□□□□□ -1.77
PABPC1-214ENST00000520142 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
PABPC1-214ENST00000520142 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
PABPC1-214ENST00000520142 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
PABPC1-214ENST00000520142 MT1MQ8N339 61 aa3.93□□□□□ -1.78
PABPC1-214ENST00000520142 MT3P25713 68 aa3.92□□□□□ -1.78
PABPC1-214ENST00000520142 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
PABPC1-214ENST00000520142 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
PABPC1-214ENST00000520142 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
PABPC1-214ENST00000520142 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
PABPC1-214ENST00000520142 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
PABPC1-214ENST00000520142 MT4P47944 62 aa3.74□□□□□ -1.81
PABPC1-214ENST00000520142 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
PABPC1-214ENST00000520142 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
PABPC1-214ENST00000520142 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
PABPC1-214ENST00000520142 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
PABPC1-214ENST00000520142 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
PABPC1-214ENST00000520142 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
PABPC1-214ENST00000520142 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
PABPC1-214ENST00000520142 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
PABPC1-214ENST00000520142 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
PABPC1-214ENST00000520142 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
PABPC1-214ENST00000520142 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
PABPC1-214ENST00000520142 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
PABPC1-214ENST00000520142 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
PABPC1-214ENST00000520142 MT1AP04731 61 aa3.38□□□□□ -1.87
PABPC1-214ENST00000520142 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
PABPC1-214ENST00000520142 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PABPC1-214ENST00000520142 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
PABPC1-214ENST00000520142 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
PABPC1-214ENST00000520142 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
PABPC1-214ENST00000520142 INE1O15225 51 aa3.15□□□□□ -1.91
PABPC1-214ENST00000520142 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
PABPC1-214ENST00000520142 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
PABPC1-214ENST00000520142 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
PABPC1-214ENST00000520142 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
PABPC1-214ENST00000520142 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
PABPC1-214ENST00000520142 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
PABPC1-214ENST00000520142 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
PABPC1-214ENST00000520142 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
PABPC1-214ENST00000520142 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
PABPC1-214ENST00000520142 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
PABPC1-214ENST00000520142 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
PABPC1-214ENST00000520142 PRM1P04553 51 aa2.25□□□□□ -2.05
PABPC1-214ENST00000520142 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
PABPC1-214ENST00000520142 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
PABPC1-214ENST00000520142 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
PABPC1-214ENST00000520142 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PABPC1-214ENST00000520142 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms