RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
HPS4-218ENST00000519774 SPRR2EP22531 72 aa4.55□□□□□ -1.68
HPS4-218ENST00000519774 SPRR2BP35325 72 aa4.55□□□□□ -1.68
HPS4-218ENST00000519774 SPRR2AP35326 72 aa4.55□□□□□ -1.68
HPS4-218ENST00000519774 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
HPS4-218ENST00000519774 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
HPS4-218ENST00000519774 A6NED7 52 aa4.52□□□□□ -1.69
HPS4-218ENST00000519774 K7ERS5 55 aa4.49□□□□□ -1.69
HPS4-218ENST00000519774 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
HPS4-218ENST00000519774 TNP1P09430 55 aa4.48□□□□□ -1.69
HPS4-218ENST00000519774 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
HPS4-218ENST00000519774 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
HPS4-218ENST00000519774 MT3P25713 68 aa4.41□□□□□ -1.7
HPS4-218ENST00000519774 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
HPS4-218ENST00000519774 SPRR2DP22532 72 aa4.4□□□□□ -1.71
HPS4-218ENST00000519774 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
HPS4-218ENST00000519774 MT1EP04732 61 aa4.39□□□□□ -1.71
HPS4-218ENST00000519774 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
HPS4-218ENST00000519774 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
HPS4-218ENST00000519774 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
HPS4-218ENST00000519774 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
HPS4-218ENST00000519774 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
HPS4-218ENST00000519774 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
HPS4-218ENST00000519774 MT1LQ93083 61 aa4.24□□□□□ -1.73
HPS4-218ENST00000519774 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
HPS4-218ENST00000519774 ROMO1P60602 79 aa4.22□□□□□ -1.73
HPS4-218ENST00000519774 MT1GP13640 62 aa4.21□□□□□ -1.74
HPS4-218ENST00000519774 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
HPS4-218ENST00000519774 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
HPS4-218ENST00000519774 MT1MQ8N339 61 aa4.17□□□□□ -1.74
HPS4-218ENST00000519774 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
HPS4-218ENST00000519774 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
HPS4-218ENST00000519774 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
HPS4-218ENST00000519774 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
HPS4-218ENST00000519774 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
HPS4-218ENST00000519774 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
HPS4-218ENST00000519774 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
HPS4-218ENST00000519774 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
HPS4-218ENST00000519774 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
HPS4-218ENST00000519774 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
HPS4-218ENST00000519774 MT4P47944 62 aa3.84□□□□□ -1.79
HPS4-218ENST00000519774 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
HPS4-218ENST00000519774 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
HPS4-218ENST00000519774 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
HPS4-218ENST00000519774 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
HPS4-218ENST00000519774 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
HPS4-218ENST00000519774 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
HPS4-218ENST00000519774 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
HPS4-218ENST00000519774 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
HPS4-218ENST00000519774 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
HPS4-218ENST00000519774 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
HPS4-218ENST00000519774 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
HPS4-218ENST00000519774 MT1AP04731 61 aa3.6□□□□□ -1.83
HPS4-218ENST00000519774 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
HPS4-218ENST00000519774 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
HPS4-218ENST00000519774 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
HPS4-218ENST00000519774 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
HPS4-218ENST00000519774 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
HPS4-218ENST00000519774 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
HPS4-218ENST00000519774 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
HPS4-218ENST00000519774 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
HPS4-218ENST00000519774 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
HPS4-218ENST00000519774 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
HPS4-218ENST00000519774 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
HPS4-218ENST00000519774 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
HPS4-218ENST00000519774 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
HPS4-218ENST00000519774 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
HPS4-218ENST00000519774 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
HPS4-218ENST00000519774 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
HPS4-218ENST00000519774 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
HPS4-218ENST00000519774 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
HPS4-218ENST00000519774 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
HPS4-218ENST00000519774 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
HPS4-218ENST00000519774 PRM1P04553 51 aa2.18□□□□□ -2.06
HPS4-218ENST00000519774 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
HPS4-218ENST00000519774 INE1O15225 51 aa2.14□□□□□ -2.07
HPS4-218ENST00000519774 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
HPS4-218ENST00000519774 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 119.8 ms