RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 Q1T7F1 81 aa4.36□□□□□ -1.71
SPIDR-212ENST00000519661 V9GYY9 64 aa4.36□□□□□ -1.71
SPIDR-212ENST00000519661 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
SPIDR-212ENST00000519661 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
SPIDR-212ENST00000519661 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
SPIDR-212ENST00000519661 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
SPIDR-212ENST00000519661 MT1EP04732 61 aa4.31□□□□□ -1.72
SPIDR-212ENST00000519661 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
SPIDR-212ENST00000519661 SPRR2DP22532 72 aa4.27□□□□□ -1.73
SPIDR-212ENST00000519661 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SPIDR-212ENST00000519661 TNP1P09430 55 aa4.26□□□□□ -1.73
SPIDR-212ENST00000519661 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
SPIDR-212ENST00000519661 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
SPIDR-212ENST00000519661 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
SPIDR-212ENST00000519661 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
SPIDR-212ENST00000519661 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
SPIDR-212ENST00000519661 PSPHP1O15172 72 aa4.21□□□□□ -1.74
SPIDR-212ENST00000519661 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SPIDR-212ENST00000519661 MT1GP13640 62 aa4.17□□□□□ -1.74
SPIDR-212ENST00000519661 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
SPIDR-212ENST00000519661 K7ERS5 55 aa4.14□□□□□ -1.75
SPIDR-212ENST00000519661 MT1LQ93083 61 aa4.13□□□□□ -1.75
SPIDR-212ENST00000519661 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
SPIDR-212ENST00000519661 A6NED7 52 aa4.09□□□□□ -1.75
SPIDR-212ENST00000519661 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
SPIDR-212ENST00000519661 MT1MQ8N339 61 aa4.07□□□□□ -1.76
SPIDR-212ENST00000519661 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
SPIDR-212ENST00000519661 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
SPIDR-212ENST00000519661 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
SPIDR-212ENST00000519661 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
SPIDR-212ENST00000519661 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
SPIDR-212ENST00000519661 ROMO1P60602 79 aa3.92□□□□□ -1.78
SPIDR-212ENST00000519661 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
SPIDR-212ENST00000519661 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
SPIDR-212ENST00000519661 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
SPIDR-212ENST00000519661 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
SPIDR-212ENST00000519661 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SPIDR-212ENST00000519661 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
SPIDR-212ENST00000519661 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
SPIDR-212ENST00000519661 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
SPIDR-212ENST00000519661 MT4P47944 62 aa3.67□□□□□ -1.82
SPIDR-212ENST00000519661 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
SPIDR-212ENST00000519661 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
SPIDR-212ENST00000519661 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
SPIDR-212ENST00000519661 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
SPIDR-212ENST00000519661 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
SPIDR-212ENST00000519661 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
SPIDR-212ENST00000519661 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
SPIDR-212ENST00000519661 MT1AP04731 61 aa3.53□□□□□ -1.84
SPIDR-212ENST00000519661 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
SPIDR-212ENST00000519661 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
SPIDR-212ENST00000519661 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
SPIDR-212ENST00000519661 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
SPIDR-212ENST00000519661 MT3P25713 68 aa3.41□□□□□ -1.86
SPIDR-212ENST00000519661 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
SPIDR-212ENST00000519661 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
SPIDR-212ENST00000519661 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
SPIDR-212ENST00000519661 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
SPIDR-212ENST00000519661 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SPIDR-212ENST00000519661 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
SPIDR-212ENST00000519661 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
SPIDR-212ENST00000519661 LCE1EQ5T753 118 aa3□□□□□ -1.93
SPIDR-212ENST00000519661 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SPIDR-212ENST00000519661 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
SPIDR-212ENST00000519661 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
SPIDR-212ENST00000519661 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
SPIDR-212ENST00000519661 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SPIDR-212ENST00000519661 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SPIDR-212ENST00000519661 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SPIDR-212ENST00000519661 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
SPIDR-212ENST00000519661 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
SPIDR-212ENST00000519661 INE1O15225 51 aa2.52□□□□□ -2.01
SPIDR-212ENST00000519661 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SPIDR-212ENST00000519661 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SPIDR-212ENST00000519661 PRM1P04553 51 aa1.97□□□□□ -2.09
SPIDR-212ENST00000519661 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
SPIDR-212ENST00000519661 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SPIDR-212ENST00000519661 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 160.3 ms