RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
SDC2-203ENST00000519587 H3BS24 57 aa5.33□□□□□ -1.56
SDC2-203ENST00000519587 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
SDC2-203ENST00000519587 SPRR2DP22532 72 aa5.32□□□□□ -1.56
SDC2-203ENST00000519587 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
SDC2-203ENST00000519587 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
SDC2-203ENST00000519587 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
SDC2-203ENST00000519587 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
SDC2-203ENST00000519587 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
SDC2-203ENST00000519587 MT1EP04732 61 aa5.21□□□□□ -1.58
SDC2-203ENST00000519587 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
SDC2-203ENST00000519587 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
SDC2-203ENST00000519587 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SDC2-203ENST00000519587 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
SDC2-203ENST00000519587 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
SDC2-203ENST00000519587 MT1LQ93083 61 aa5.06□□□□□ -1.6
SDC2-203ENST00000519587 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
SDC2-203ENST00000519587 MT1GP13640 62 aa5.02□□□□□ -1.61
SDC2-203ENST00000519587 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SDC2-203ENST00000519587 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
SDC2-203ENST00000519587 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
SDC2-203ENST00000519587 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
SDC2-203ENST00000519587 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
SDC2-203ENST00000519587 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SDC2-203ENST00000519587 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
SDC2-203ENST00000519587 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
SDC2-203ENST00000519587 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
SDC2-203ENST00000519587 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
SDC2-203ENST00000519587 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
SDC2-203ENST00000519587 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
SDC2-203ENST00000519587 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
SDC2-203ENST00000519587 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
SDC2-203ENST00000519587 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
SDC2-203ENST00000519587 MT4P47944 62 aa4.7□□□□□ -1.66
SDC2-203ENST00000519587 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
SDC2-203ENST00000519587 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SDC2-203ENST00000519587 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
SDC2-203ENST00000519587 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
SDC2-203ENST00000519587 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
SDC2-203ENST00000519587 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
SDC2-203ENST00000519587 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
SDC2-203ENST00000519587 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SDC2-203ENST00000519587 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
SDC2-203ENST00000519587 MT1AP04731 61 aa4.32□□□□□ -1.72
SDC2-203ENST00000519587 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
SDC2-203ENST00000519587 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
SDC2-203ENST00000519587 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
SDC2-203ENST00000519587 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
SDC2-203ENST00000519587 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
SDC2-203ENST00000519587 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
SDC2-203ENST00000519587 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SDC2-203ENST00000519587 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
SDC2-203ENST00000519587 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
SDC2-203ENST00000519587 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SDC2-203ENST00000519587 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
SDC2-203ENST00000519587 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
SDC2-203ENST00000519587 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
SDC2-203ENST00000519587 MT3P25713 68 aa3.94□□□□□ -1.78
SDC2-203ENST00000519587 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
SDC2-203ENST00000519587 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SDC2-203ENST00000519587 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SDC2-203ENST00000519587 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
SDC2-203ENST00000519587 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
SDC2-203ENST00000519587 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
SDC2-203ENST00000519587 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
SDC2-203ENST00000519587 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
SDC2-203ENST00000519587 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SDC2-203ENST00000519587 INE1O15225 51 aa3.2□□□□□ -1.9
SDC2-203ENST00000519587 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
SDC2-203ENST00000519587 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SDC2-203ENST00000519587 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
SDC2-203ENST00000519587 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
SDC2-203ENST00000519587 PRM1P04553 51 aa2.83□□□□□ -1.96
SDC2-203ENST00000519587 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
SDC2-203ENST00000519587 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
SDC2-203ENST00000519587 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
SDC2-203ENST00000519587 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SDC2-203ENST00000519587 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms