RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
TRAPPC9-206ENST00000519482 SPRR2DP22532 72 aa4.97□□□□□ -1.61
TRAPPC9-206ENST00000519482 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC9-206ENST00000519482 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
TRAPPC9-206ENST00000519482 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
TRAPPC9-206ENST00000519482 TNP1P09430 55 aa4.95□□□□□ -1.62
TRAPPC9-206ENST00000519482 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
TRAPPC9-206ENST00000519482 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
TRAPPC9-206ENST00000519482 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
TRAPPC9-206ENST00000519482 MT1EP04732 61 aa4.63□□□□□ -1.67
TRAPPC9-206ENST00000519482 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
TRAPPC9-206ENST00000519482 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
TRAPPC9-206ENST00000519482 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
TRAPPC9-206ENST00000519482 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
TRAPPC9-206ENST00000519482 MT1GP13640 62 aa4.52□□□□□ -1.69
TRAPPC9-206ENST00000519482 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
TRAPPC9-206ENST00000519482 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
TRAPPC9-206ENST00000519482 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
TRAPPC9-206ENST00000519482 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
TRAPPC9-206ENST00000519482 MT1MQ8N339 61 aa4.42□□□□□ -1.7
TRAPPC9-206ENST00000519482 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
TRAPPC9-206ENST00000519482 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
TRAPPC9-206ENST00000519482 MT1LQ93083 61 aa4.41□□□□□ -1.7
TRAPPC9-206ENST00000519482 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
TRAPPC9-206ENST00000519482 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
TRAPPC9-206ENST00000519482 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
TRAPPC9-206ENST00000519482 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
TRAPPC9-206ENST00000519482 MT4P47944 62 aa4.34□□□□□ -1.71
TRAPPC9-206ENST00000519482 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
TRAPPC9-206ENST00000519482 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
TRAPPC9-206ENST00000519482 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
TRAPPC9-206ENST00000519482 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
TRAPPC9-206ENST00000519482 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
TRAPPC9-206ENST00000519482 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
TRAPPC9-206ENST00000519482 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
TRAPPC9-206ENST00000519482 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
TRAPPC9-206ENST00000519482 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC9-206ENST00000519482 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
TRAPPC9-206ENST00000519482 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
TRAPPC9-206ENST00000519482 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
TRAPPC9-206ENST00000519482 H3BS24 57 aa4.02□□□□□ -1.77
TRAPPC9-206ENST00000519482 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
TRAPPC9-206ENST00000519482 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
TRAPPC9-206ENST00000519482 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
TRAPPC9-206ENST00000519482 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
TRAPPC9-206ENST00000519482 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
TRAPPC9-206ENST00000519482 MT1AP04731 61 aa3.76□□□□□ -1.81
TRAPPC9-206ENST00000519482 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
TRAPPC9-206ENST00000519482 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
TRAPPC9-206ENST00000519482 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
TRAPPC9-206ENST00000519482 INE1O15225 51 aa3.68□□□□□ -1.82
TRAPPC9-206ENST00000519482 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
TRAPPC9-206ENST00000519482 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
TRAPPC9-206ENST00000519482 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
TRAPPC9-206ENST00000519482 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC9-206ENST00000519482 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
TRAPPC9-206ENST00000519482 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
TRAPPC9-206ENST00000519482 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
TRAPPC9-206ENST00000519482 MT3P25713 68 aa3.46□□□□□ -1.86
TRAPPC9-206ENST00000519482 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
TRAPPC9-206ENST00000519482 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
TRAPPC9-206ENST00000519482 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
TRAPPC9-206ENST00000519482 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
TRAPPC9-206ENST00000519482 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
TRAPPC9-206ENST00000519482 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
TRAPPC9-206ENST00000519482 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
TRAPPC9-206ENST00000519482 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
TRAPPC9-206ENST00000519482 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
TRAPPC9-206ENST00000519482 PRM1P04553 51 aa2.74□□□□□ -1.97
TRAPPC9-206ENST00000519482 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
TRAPPC9-206ENST00000519482 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC9-206ENST00000519482 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
TRAPPC9-206ENST00000519482 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
TRAPPC9-206ENST00000519482 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
TRAPPC9-206ENST00000519482 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
TRAPPC9-206ENST00000519482 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
TRAPPC9-206ENST00000519482 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TRAPPC9-206ENST00000519482 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 87.8 ms