RNA–Protein interactions for RNA: ENST00000519305.6

NPIPB3-204, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 848 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-204ENST00000519305 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
NPIPB3-204ENST00000519305 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
NPIPB3-204ENST00000519305 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
NPIPB3-204ENST00000519305 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
NPIPB3-204ENST00000519305 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
NPIPB3-204ENST00000519305 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
NPIPB3-204ENST00000519305 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
NPIPB3-204ENST00000519305 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
NPIPB3-204ENST00000519305 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
NPIPB3-204ENST00000519305 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
NPIPB3-204ENST00000519305 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
NPIPB3-204ENST00000519305 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
NPIPB3-204ENST00000519305 KMT2DO14686 5537 aa3.67□□□□□ -1.82
NPIPB3-204ENST00000519305 MT1EP04732 61 aa3.67□□□□□ -1.82
NPIPB3-204ENST00000519305 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
NPIPB3-204ENST00000519305 MT1LQ93083 61 aa3.58□□□□□ -1.84
NPIPB3-204ENST00000519305 SPRR2EP22531 72 aa3.57□□□□□ -1.84
NPIPB3-204ENST00000519305 SPRR2BP35325 72 aa3.57□□□□□ -1.84
NPIPB3-204ENST00000519305 SPRR2AP35326 72 aa3.57□□□□□ -1.84
NPIPB3-204ENST00000519305 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
NPIPB3-204ENST00000519305 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
NPIPB3-204ENST00000519305 MT1GP13640 62 aa3.55□□□□□ -1.84
NPIPB3-204ENST00000519305 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
NPIPB3-204ENST00000519305 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
NPIPB3-204ENST00000519305 MT1MQ8N339 61 aa3.47□□□□□ -1.85
NPIPB3-204ENST00000519305 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
NPIPB3-204ENST00000519305 SPRR2DP22532 72 aa3.44□□□□□ -1.86
NPIPB3-204ENST00000519305 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
NPIPB3-204ENST00000519305 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
NPIPB3-204ENST00000519305 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
NPIPB3-204ENST00000519305 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
NPIPB3-204ENST00000519305 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
NPIPB3-204ENST00000519305 NEBP20929 6669 aa3.3□□□□□ -1.88
NPIPB3-204ENST00000519305 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
NPIPB3-204ENST00000519305 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
NPIPB3-204ENST00000519305 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
NPIPB3-204ENST00000519305 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
NPIPB3-204ENST00000519305 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
NPIPB3-204ENST00000519305 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
NPIPB3-204ENST00000519305 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
NPIPB3-204ENST00000519305 MT3P25713 68 aa3.16□□□□□ -1.9
NPIPB3-204ENST00000519305 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
NPIPB3-204ENST00000519305 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
NPIPB3-204ENST00000519305 MT1AP04731 61 aa3.07□□□□□ -1.92
NPIPB3-204ENST00000519305 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
NPIPB3-204ENST00000519305 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
NPIPB3-204ENST00000519305 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
NPIPB3-204ENST00000519305 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
NPIPB3-204ENST00000519305 MT4P47944 62 aa2.98□□□□□ -1.93
NPIPB3-204ENST00000519305 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
NPIPB3-204ENST00000519305 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
NPIPB3-204ENST00000519305 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
NPIPB3-204ENST00000519305 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
NPIPB3-204ENST00000519305 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
NPIPB3-204ENST00000519305 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
NPIPB3-204ENST00000519305 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
NPIPB3-204ENST00000519305 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
NPIPB3-204ENST00000519305 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
NPIPB3-204ENST00000519305 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
NPIPB3-204ENST00000519305 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
NPIPB3-204ENST00000519305 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
NPIPB3-204ENST00000519305 INE1O15225 51 aa2.56□□□□□ -2
NPIPB3-204ENST00000519305 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
NPIPB3-204ENST00000519305 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
NPIPB3-204ENST00000519305 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
NPIPB3-204ENST00000519305 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
NPIPB3-204ENST00000519305 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
NPIPB3-204ENST00000519305 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
NPIPB3-204ENST00000519305 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
NPIPB3-204ENST00000519305 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
NPIPB3-204ENST00000519305 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
NPIPB3-204ENST00000519305 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
NPIPB3-204ENST00000519305 PRM1P04553 51 aa2.11□□□□□ -2.07
NPIPB3-204ENST00000519305 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
NPIPB3-204ENST00000519305 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
NPIPB3-204ENST00000519305 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
NPIPB3-204ENST00000519305 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
NPIPB3-204ENST00000519305 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 160.7 ms