RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
SH2D4A-204ENST00000519207 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
SH2D4A-204ENST00000519207 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
SH2D4A-204ENST00000519207 MT1BP07438 61 aa4.07□□□□□ -1.76
SH2D4A-204ENST00000519207 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
SH2D4A-204ENST00000519207 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
SH2D4A-204ENST00000519207 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
SH2D4A-204ENST00000519207 MT1XP80297 61 aa4.03□□□□□ -1.76
SH2D4A-204ENST00000519207 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
SH2D4A-204ENST00000519207 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
SH2D4A-204ENST00000519207 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
SH2D4A-204ENST00000519207 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
SH2D4A-204ENST00000519207 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SH2D4A-204ENST00000519207 NEBP20929 6669 aa3.86□□□□□ -1.79
SH2D4A-204ENST00000519207 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
SH2D4A-204ENST00000519207 KMT2DO14686 5537 aa3.73□□□□□ -1.81
SH2D4A-204ENST00000519207 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
SH2D4A-204ENST00000519207 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
SH2D4A-204ENST00000519207 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
SH2D4A-204ENST00000519207 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
SH2D4A-204ENST00000519207 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
SH2D4A-204ENST00000519207 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
SH2D4A-204ENST00000519207 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SH2D4A-204ENST00000519207 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SH2D4A-204ENST00000519207 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
SH2D4A-204ENST00000519207 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
SH2D4A-204ENST00000519207 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
SH2D4A-204ENST00000519207 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
SH2D4A-204ENST00000519207 SPRR2EP22531 72 aa3.54□□□□□ -1.84
SH2D4A-204ENST00000519207 SPRR2BP35325 72 aa3.54□□□□□ -1.84
SH2D4A-204ENST00000519207 SPRR2AP35326 72 aa3.54□□□□□ -1.84
SH2D4A-204ENST00000519207 MT1EP04732 61 aa3.49□□□□□ -1.85
SH2D4A-204ENST00000519207 MT3P25713 68 aa3.49□□□□□ -1.85
SH2D4A-204ENST00000519207 MT1LQ93083 61 aa3.49□□□□□ -1.85
SH2D4A-204ENST00000519207 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
SH2D4A-204ENST00000519207 SPRR2DP22532 72 aa3.42□□□□□ -1.86
SH2D4A-204ENST00000519207 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
SH2D4A-204ENST00000519207 MT1GP13640 62 aa3.29□□□□□ -1.88
SH2D4A-204ENST00000519207 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
SH2D4A-204ENST00000519207 MT1MQ8N339 61 aa3.27□□□□□ -1.89
SH2D4A-204ENST00000519207 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SH2D4A-204ENST00000519207 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SH2D4A-204ENST00000519207 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
SH2D4A-204ENST00000519207 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
SH2D4A-204ENST00000519207 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
SH2D4A-204ENST00000519207 MT4P47944 62 aa3.02□□□□□ -1.93
SH2D4A-204ENST00000519207 MT1AP04731 61 aa2.96□□□□□ -1.94
SH2D4A-204ENST00000519207 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
SH2D4A-204ENST00000519207 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
SH2D4A-204ENST00000519207 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
SH2D4A-204ENST00000519207 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
SH2D4A-204ENST00000519207 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
SH2D4A-204ENST00000519207 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
SH2D4A-204ENST00000519207 PRM1P04553 51 aa2.87□□□□□ -1.95
SH2D4A-204ENST00000519207 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
SH2D4A-204ENST00000519207 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SH2D4A-204ENST00000519207 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
SH2D4A-204ENST00000519207 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SH2D4A-204ENST00000519207 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
SH2D4A-204ENST00000519207 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
SH2D4A-204ENST00000519207 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
SH2D4A-204ENST00000519207 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
SH2D4A-204ENST00000519207 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SH2D4A-204ENST00000519207 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
SH2D4A-204ENST00000519207 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
SH2D4A-204ENST00000519207 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
SH2D4A-204ENST00000519207 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
SH2D4A-204ENST00000519207 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
SH2D4A-204ENST00000519207 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
SH2D4A-204ENST00000519207 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
SH2D4A-204ENST00000519207 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
SH2D4A-204ENST00000519207 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
SH2D4A-204ENST00000519207 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
SH2D4A-204ENST00000519207 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SH2D4A-204ENST00000519207 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SH2D4A-204ENST00000519207 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
SH2D4A-204ENST00000519207 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms