RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
PABPC1-207ENST00000518716 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
PABPC1-207ENST00000518716 KMT2DO14686 5537 aa2.92□□□□□ -1.94
PABPC1-207ENST00000518716 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PABPC1-207ENST00000518716 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
PABPC1-207ENST00000518716 Q6ZQY7 126 aa2.92□□□□□ -1.94
PABPC1-207ENST00000518716 DEFB105AQ8NG35 78 aa2.92□□□□□ -1.94
PABPC1-207ENST00000518716 HRES1P13985 223 aa2.9□□□□□ -1.95
PABPC1-207ENST00000518716 ACYP2P14621 99 aa2.9□□□□□ -1.95
PABPC1-207ENST00000518716 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
PABPC1-207ENST00000518716 Q96NJ1 140 aa2.9□□□□□ -1.95
PABPC1-207ENST00000518716 R4GN34 69 aa2.9□□□□□ -1.95
PABPC1-207ENST00000518716 TP53AIP1Q9HCN2 124 aa2.89□□□□□ -1.95
PABPC1-207ENST00000518716 IGFL1Q6UW32 110 aa2.88□□□□□ -1.95
PABPC1-207ENST00000518716 Q8N9L7 120 aa2.88□□□□□ -1.95
PABPC1-207ENST00000518716 LINC00575Q6W349 94 aa2.87□□□□□ -1.95
PABPC1-207ENST00000518716 INE1O15225 51 aa2.86□□□□□ -1.95
PABPC1-207ENST00000518716 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
PABPC1-207ENST00000518716 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
PABPC1-207ENST00000518716 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
PABPC1-207ENST00000518716 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
PABPC1-207ENST00000518716 MT1BP07438 61 aa2.76□□□□□ -1.97
PABPC1-207ENST00000518716 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
PABPC1-207ENST00000518716 K7EQZ3 153 aa2.72□□□□□ -1.97
PABPC1-207ENST00000518716 KRTAP19-8Q3LI54 63 aa2.72□□□□□ -1.97
PABPC1-207ENST00000518716 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
PABPC1-207ENST00000518716 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
PABPC1-207ENST00000518716 WFDC13Q8IUB5 93 aa2.68□□□□□ -1.98
PABPC1-207ENST00000518716 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
PABPC1-207ENST00000518716 MRPL34Q9BQ48 92 aaKnown RBP2.67□□□□□ -1.98
PABPC1-207ENST00000518716 SPRR2EP22531 72 aa2.66□□□□□ -1.98
PABPC1-207ENST00000518716 SPRR2BP35325 72 aa2.66□□□□□ -1.98
PABPC1-207ENST00000518716 SPRR2AP35326 72 aa2.66□□□□□ -1.98
PABPC1-207ENST00000518716 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
PABPC1-207ENST00000518716 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
PABPC1-207ENST00000518716 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
PABPC1-207ENST00000518716 H0YAA0 97 aa2.58□□□□□ -2
PABPC1-207ENST00000518716 SPRR2DP22532 72 aa2.57□□□□□ -2
PABPC1-207ENST00000518716 MMP24-AS1A0A0U1RRL7 71 aa2.56□□□□□ -2
PABPC1-207ENST00000518716 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
PABPC1-207ENST00000518716 MT1XP80297 61 aa2.52□□□□□ -2.01
PABPC1-207ENST00000518716 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
PABPC1-207ENST00000518716 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
PABPC1-207ENST00000518716 S4R3F8 94 aa2.46□□□□□ -2.02
PABPC1-207ENST00000518716 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
PABPC1-207ENST00000518716 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
PABPC1-207ENST00000518716 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
PABPC1-207ENST00000518716 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
PABPC1-207ENST00000518716 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
PABPC1-207ENST00000518716 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
PABPC1-207ENST00000518716 MT4P47944 62 aa2.27□□□□□ -2.05
PABPC1-207ENST00000518716 KRTAP19-7Q3SYF9 63 aa2.27□□□□□ -2.05
PABPC1-207ENST00000518716 KRTAP19-3Q7Z4W3 81 aa2.27□□□□□ -2.05
PABPC1-207ENST00000518716 MT1EP04732 61 aa2.25□□□□□ -2.05
PABPC1-207ENST00000518716 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PABPC1-207ENST00000518716 M0QZ58 72 aa2.21□□□□□ -2.06
PABPC1-207ENST00000518716 MT1GP13640 62 aa2.18□□□□□ -2.06
PABPC1-207ENST00000518716 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
PABPC1-207ENST00000518716 MT1MQ8N339 61 aa2.15□□□□□ -2.07
PABPC1-207ENST00000518716 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
PABPC1-207ENST00000518716 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
PABPC1-207ENST00000518716 A0A0D9SG42 100 aa2.12□□□□□ -2.07
PABPC1-207ENST00000518716 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
PABPC1-207ENST00000518716 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
PABPC1-207ENST00000518716 MT1LQ93083 61 aa2.1□□□□□ -2.07
PABPC1-207ENST00000518716 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
PABPC1-207ENST00000518716 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
PABPC1-207ENST00000518716 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
PABPC1-207ENST00000518716 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
PABPC1-207ENST00000518716 TNP1P09430 55 aa1.95□□□□□ -2.1
PABPC1-207ENST00000518716 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
PABPC1-207ENST00000518716 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
PABPC1-207ENST00000518716 MT1AP04731 61 aa1.77□□□□□ -2.13
PABPC1-207ENST00000518716 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
PABPC1-207ENST00000518716 PRM1P04553 51 aa1.41□□□□□ -2.18
PABPC1-207ENST00000518716 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
PABPC1-207ENST00000518716 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PABPC1-207ENST00000518716 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 539.5 ms