RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 ROMO1P60602 79 aa6.65□□□□□ -1.34
TRAM1-202ENST00000518678 KRTAP19-7Q3SYF9 63 aa6.63□□□□□ -1.35
TRAM1-202ENST00000518678 SPRR2DP22532 72 aa6.61□□□□□ -1.35
TRAM1-202ENST00000518678 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
TRAM1-202ENST00000518678 MT1EP04732 61 aa6.55□□□□□ -1.36
TRAM1-202ENST00000518678 KRTAP2-2Q9BYT5 123 aa6.55□□□□□ -1.36
TRAM1-202ENST00000518678 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
TRAM1-202ENST00000518678 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
TRAM1-202ENST00000518678 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
TRAM1-202ENST00000518678 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
TRAM1-202ENST00000518678 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
TRAM1-202ENST00000518678 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
TRAM1-202ENST00000518678 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
TRAM1-202ENST00000518678 MT1LQ93083 61 aa6.34□□□□□ -1.39
TRAM1-202ENST00000518678 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
TRAM1-202ENST00000518678 MT1GP13640 62 aa6.3□□□□□ -1.4
TRAM1-202ENST00000518678 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
TRAM1-202ENST00000518678 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
TRAM1-202ENST00000518678 MT1MQ8N339 61 aa6.2□□□□□ -1.42
TRAM1-202ENST00000518678 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
TRAM1-202ENST00000518678 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
TRAM1-202ENST00000518678 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
TRAM1-202ENST00000518678 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
TRAM1-202ENST00000518678 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
TRAM1-202ENST00000518678 GPR98Q8WXG9 6306 aa6.02□□□□□ -1.45
TRAM1-202ENST00000518678 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
TRAM1-202ENST00000518678 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
TRAM1-202ENST00000518678 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
TRAM1-202ENST00000518678 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
TRAM1-202ENST00000518678 KTN1-AS1Q86SY8 53 aa5.88□□□□□ -1.47
TRAM1-202ENST00000518678 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
TRAM1-202ENST00000518678 MT4P47944 62 aa5.85□□□□□ -1.47
TRAM1-202ENST00000518678 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
TRAM1-202ENST00000518678 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
TRAM1-202ENST00000518678 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
TRAM1-202ENST00000518678 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
TRAM1-202ENST00000518678 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
TRAM1-202ENST00000518678 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
TRAM1-202ENST00000518678 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
TRAM1-202ENST00000518678 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
TRAM1-202ENST00000518678 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
TRAM1-202ENST00000518678 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
TRAM1-202ENST00000518678 MT1AP04731 61 aa5.41□□□□□ -1.54
TRAM1-202ENST00000518678 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
TRAM1-202ENST00000518678 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
TRAM1-202ENST00000518678 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
TRAM1-202ENST00000518678 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
TRAM1-202ENST00000518678 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
TRAM1-202ENST00000518678 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
TRAM1-202ENST00000518678 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
TRAM1-202ENST00000518678 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
TRAM1-202ENST00000518678 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
TRAM1-202ENST00000518678 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
TRAM1-202ENST00000518678 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
TRAM1-202ENST00000518678 MT3P25713 68 aa4.92□□□□□ -1.62
TRAM1-202ENST00000518678 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
TRAM1-202ENST00000518678 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
TRAM1-202ENST00000518678 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
TRAM1-202ENST00000518678 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
TRAM1-202ENST00000518678 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
TRAM1-202ENST00000518678 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
TRAM1-202ENST00000518678 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
TRAM1-202ENST00000518678 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
TRAM1-202ENST00000518678 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
TRAM1-202ENST00000518678 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
TRAM1-202ENST00000518678 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
TRAM1-202ENST00000518678 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
TRAM1-202ENST00000518678 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
TRAM1-202ENST00000518678 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
TRAM1-202ENST00000518678 INE1O15225 51 aa3.67□□□□□ -1.82
TRAM1-202ENST00000518678 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
TRAM1-202ENST00000518678 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
TRAM1-202ENST00000518678 PRM1P04553 51 aa3.42□□□□□ -1.86
TRAM1-202ENST00000518678 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
TRAM1-202ENST00000518678 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TRAM1-202ENST00000518678 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
TRAM1-202ENST00000518678 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
TRAM1-202ENST00000518678 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 68.9 ms