RNA–Protein interactions for RNA: ENST00000518615.2

SFTPC-203, Transcript of surfactant protein C, humanhuman

TSL 2

Gene SFTPC, Length 377 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-203ENST00000518615 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
SFTPC-203ENST00000518615 K7ERS5 55 aa4.28□□□□□ -1.72
SFTPC-203ENST00000518615 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
SFTPC-203ENST00000518615 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
SFTPC-203ENST00000518615 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
SFTPC-203ENST00000518615 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
SFTPC-203ENST00000518615 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
SFTPC-203ENST00000518615 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
SFTPC-203ENST00000518615 MT1GP13640 62 aa4.17□□□□□ -1.74
SFTPC-203ENST00000518615 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
SFTPC-203ENST00000518615 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
SFTPC-203ENST00000518615 MT1MQ8N339 61 aa4.14□□□□□ -1.75
SFTPC-203ENST00000518615 MT1LQ93083 61 aa4.12□□□□□ -1.75
SFTPC-203ENST00000518615 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
SFTPC-203ENST00000518615 MT4P47944 62 aa4.1□□□□□ -1.75
SFTPC-203ENST00000518615 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
SFTPC-203ENST00000518615 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
SFTPC-203ENST00000518615 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
SFTPC-203ENST00000518615 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
SFTPC-203ENST00000518615 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
SFTPC-203ENST00000518615 ROMO1P60602 79 aa4.05□□□□□ -1.76
SFTPC-203ENST00000518615 TNP1P09430 55 aa4.03□□□□□ -1.76
SFTPC-203ENST00000518615 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
SFTPC-203ENST00000518615 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
SFTPC-203ENST00000518615 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
SFTPC-203ENST00000518615 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
SFTPC-203ENST00000518615 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SFTPC-203ENST00000518615 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
SFTPC-203ENST00000518615 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
SFTPC-203ENST00000518615 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
SFTPC-203ENST00000518615 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
SFTPC-203ENST00000518615 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
SFTPC-203ENST00000518615 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
SFTPC-203ENST00000518615 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
SFTPC-203ENST00000518615 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
SFTPC-203ENST00000518615 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
SFTPC-203ENST00000518615 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
SFTPC-203ENST00000518615 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
SFTPC-203ENST00000518615 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
SFTPC-203ENST00000518615 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
SFTPC-203ENST00000518615 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
SFTPC-203ENST00000518615 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
SFTPC-203ENST00000518615 MT1AP04731 61 aa3.5□□□□□ -1.85
SFTPC-203ENST00000518615 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
SFTPC-203ENST00000518615 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
SFTPC-203ENST00000518615 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
SFTPC-203ENST00000518615 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
SFTPC-203ENST00000518615 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
SFTPC-203ENST00000518615 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
SFTPC-203ENST00000518615 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
SFTPC-203ENST00000518615 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
SFTPC-203ENST00000518615 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
SFTPC-203ENST00000518615 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
SFTPC-203ENST00000518615 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
SFTPC-203ENST00000518615 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
SFTPC-203ENST00000518615 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
SFTPC-203ENST00000518615 MT3P25713 68 aa3.18□□□□□ -1.9
SFTPC-203ENST00000518615 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
SFTPC-203ENST00000518615 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
SFTPC-203ENST00000518615 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
SFTPC-203ENST00000518615 H3BS24 57 aa2.91□□□□□ -1.94
SFTPC-203ENST00000518615 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
SFTPC-203ENST00000518615 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
SFTPC-203ENST00000518615 INE1O15225 51 aa2.73□□□□□ -1.97
SFTPC-203ENST00000518615 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
SFTPC-203ENST00000518615 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SFTPC-203ENST00000518615 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
SFTPC-203ENST00000518615 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
SFTPC-203ENST00000518615 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SFTPC-203ENST00000518615 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
SFTPC-203ENST00000518615 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
SFTPC-203ENST00000518615 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SFTPC-203ENST00000518615 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SFTPC-203ENST00000518615 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SFTPC-203ENST00000518615 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SFTPC-203ENST00000518615 PRM1P04553 51 aa2.07□□□□□ -2.08
SFTPC-203ENST00000518615 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SFTPC-203ENST00000518615 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 79.2 ms