RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
VEGFA-217ENST00000518538 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
VEGFA-217ENST00000518538 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
VEGFA-217ENST00000518538 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
VEGFA-217ENST00000518538 MT1GP13640 62 aa7.88□□□□□ -1.15
VEGFA-217ENST00000518538 MT1LQ93083 61 aa7.85□□□□□ -1.15
VEGFA-217ENST00000518538 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
VEGFA-217ENST00000518538 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
VEGFA-217ENST00000518538 CDC42SE1Q9NRR8 79 aa7.79□□□□□ -1.16
VEGFA-217ENST00000518538 MT1MQ8N339 61 aa7.75□□□□□ -1.17
VEGFA-217ENST00000518538 KRTAP23-1A1A580 65 aa7.67□□□□□ -1.18
VEGFA-217ENST00000518538 ROMO1P60602 79 aa7.63□□□□□ -1.19
VEGFA-217ENST00000518538 DSTQ03001 7570 aaKnown RBP7.57□□□□□ -1.2
VEGFA-217ENST00000518538 KRTAP4-3Q9BYR4 195 aa7.53□□□□□ -1.2
VEGFA-217ENST00000518538 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
VEGFA-217ENST00000518538 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
VEGFA-217ENST00000518538 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
VEGFA-217ENST00000518538 KRTAP4-9Q9BYQ8 210 aa7.31□□□□□ -1.24
VEGFA-217ENST00000518538 LCE4AQ5TA78 99 aa7.29□□□□□ -1.24
VEGFA-217ENST00000518538 BRK1Q8WUW1 75 aa7.26□□□□□ -1.25
VEGFA-217ENST00000518538 KRTAP5-4Q6L8H1 288 aa7.22□□□□□ -1.25
VEGFA-217ENST00000518538 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
VEGFA-217ENST00000518538 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
VEGFA-217ENST00000518538 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.26
VEGFA-217ENST00000518538 MT4P47944 62 aa7.14□□□□□ -1.27
VEGFA-217ENST00000518538 KRTAP5-5Q701N2 237 aaPredicted RBP7.09□□□□□ -1.27
VEGFA-217ENST00000518538 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
VEGFA-217ENST00000518538 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
VEGFA-217ENST00000518538 HMCN1Q96RW7 5635 aa6.96□□□□□ -1.3
VEGFA-217ENST00000518538 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
VEGFA-217ENST00000518538 KRTAP12-4P60329 112 aa6.82□□□□□ -1.32
VEGFA-217ENST00000518538 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
VEGFA-217ENST00000518538 KRTAP20-2Q3LI61 65 aa6.78□□□□□ -1.32
VEGFA-217ENST00000518538 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
VEGFA-217ENST00000518538 MT1AP04731 61 aa6.69□□□□□ -1.34
VEGFA-217ENST00000518538 SYNE1Q8NF91 8797 aaKnown RBP6.63□□□□□ -1.35
VEGFA-217ENST00000518538 KRTAP6-1Q3LI64 71 aa6.62□□□□□ -1.35
VEGFA-217ENST00000518538 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
VEGFA-217ENST00000518538 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
VEGFA-217ENST00000518538 AHNAK2Q8IVF2 5795 aa6.56□□□□□ -1.36
VEGFA-217ENST00000518538 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
VEGFA-217ENST00000518538 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
VEGFA-217ENST00000518538 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
VEGFA-217ENST00000518538 KRTAP5-2Q701N4 177 aa6.39□□□□□ -1.39
VEGFA-217ENST00000518538 KRTAP6-2Q3LI66 62 aa6.26□□□□□ -1.41
VEGFA-217ENST00000518538 KRTAP5-7Q6L8G8 165 aa6.24□□□□□ -1.41
VEGFA-217ENST00000518538 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
VEGFA-217ENST00000518538 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
VEGFA-217ENST00000518538 MT3P25713 68 aa6.11□□□□□ -1.43
VEGFA-217ENST00000518538 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
VEGFA-217ENST00000518538 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
VEGFA-217ENST00000518538 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
VEGFA-217ENST00000518538 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
VEGFA-217ENST00000518538 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
VEGFA-217ENST00000518538 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
VEGFA-217ENST00000518538 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
VEGFA-217ENST00000518538 H3BS24 57 aa5.44□□□□□ -1.54
VEGFA-217ENST00000518538 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
VEGFA-217ENST00000518538 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.55
VEGFA-217ENST00000518538 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
VEGFA-217ENST00000518538 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
VEGFA-217ENST00000518538 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
VEGFA-217ENST00000518538 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
VEGFA-217ENST00000518538 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
VEGFA-217ENST00000518538 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
VEGFA-217ENST00000518538 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
VEGFA-217ENST00000518538 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
VEGFA-217ENST00000518538 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
VEGFA-217ENST00000518538 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
VEGFA-217ENST00000518538 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
VEGFA-217ENST00000518538 KRTAP21-2Q3LI59 83 aa4.36□□□□□ -1.71
VEGFA-217ENST00000518538 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
VEGFA-217ENST00000518538 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
VEGFA-217ENST00000518538 PRM1P04553 51 aa3.91□□□□□ -1.78
VEGFA-217ENST00000518538 INE1O15225 51 aa3.82□□□□□ -1.8
VEGFA-217ENST00000518538 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
VEGFA-217ENST00000518538 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
VEGFA-217ENST00000518538 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 163.4 ms