RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
TVP23C-205ENST00000518321 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
TVP23C-205ENST00000518321 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
TVP23C-205ENST00000518321 SPATA8Q6RVD6 105 aa5.04□□□□□ -1.6
TVP23C-205ENST00000518321 A0A1B0GU33 70 aa5.01□□□□□ -1.61
TVP23C-205ENST00000518321 A0A1B0GU69 56 aa5.01□□□□□ -1.61
TVP23C-205ENST00000518321 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
TVP23C-205ENST00000518321 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
TVP23C-205ENST00000518321 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
TVP23C-205ENST00000518321 MT4P47944 62 aa4.98□□□□□ -1.61
TVP23C-205ENST00000518321 MT1MQ8N339 61 aa4.98□□□□□ -1.61
TVP23C-205ENST00000518321 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
TVP23C-205ENST00000518321 MT1LQ93083 61 aa4.96□□□□□ -1.62
TVP23C-205ENST00000518321 V9GYY9 64 aa4.96□□□□□ -1.62
TVP23C-205ENST00000518321 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
TVP23C-205ENST00000518321 SMIM26A0A096LP01 95 aa4.89□□□□□ -1.63
TVP23C-205ENST00000518321 Q1T7F1 81 aa4.87□□□□□ -1.63
TVP23C-205ENST00000518321 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
TVP23C-205ENST00000518321 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
TVP23C-205ENST00000518321 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
TVP23C-205ENST00000518321 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
TVP23C-205ENST00000518321 TNP1P09430 55 aa4.84□□□□□ -1.63
TVP23C-205ENST00000518321 UQCR11O14957 56 aa4.83□□□□□ -1.64
TVP23C-205ENST00000518321 A8MU10 97 aa4.81□□□□□ -1.64
TVP23C-205ENST00000518321 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
TVP23C-205ENST00000518321 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
TVP23C-205ENST00000518321 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
TVP23C-205ENST00000518321 PSPHP1O15172 72 aa4.72□□□□□ -1.65
TVP23C-205ENST00000518321 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
TVP23C-205ENST00000518321 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
TVP23C-205ENST00000518321 K7ERS5 55 aa4.65□□□□□ -1.67
TVP23C-205ENST00000518321 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
TVP23C-205ENST00000518321 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
TVP23C-205ENST00000518321 A6NED7 52 aa4.63□□□□□ -1.67
TVP23C-205ENST00000518321 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
TVP23C-205ENST00000518321 MT3P25713 68 aa4.59□□□□□ -1.67
TVP23C-205ENST00000518321 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
TVP23C-205ENST00000518321 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
TVP23C-205ENST00000518321 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
TVP23C-205ENST00000518321 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
TVP23C-205ENST00000518321 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
TVP23C-205ENST00000518321 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
TVP23C-205ENST00000518321 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
TVP23C-205ENST00000518321 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
TVP23C-205ENST00000518321 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
TVP23C-205ENST00000518321 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
TVP23C-205ENST00000518321 ROMO1P60602 79 aa4.32□□□□□ -1.72
TVP23C-205ENST00000518321 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
TVP23C-205ENST00000518321 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
TVP23C-205ENST00000518321 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
TVP23C-205ENST00000518321 MT1AP04731 61 aa4.21□□□□□ -1.74
TVP23C-205ENST00000518321 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
TVP23C-205ENST00000518321 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
TVP23C-205ENST00000518321 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
TVP23C-205ENST00000518321 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
TVP23C-205ENST00000518321 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
TVP23C-205ENST00000518321 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
TVP23C-205ENST00000518321 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
TVP23C-205ENST00000518321 MUC5ACP98088 5654 aa4□□□□□ -1.77
TVP23C-205ENST00000518321 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
TVP23C-205ENST00000518321 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
TVP23C-205ENST00000518321 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
TVP23C-205ENST00000518321 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
TVP23C-205ENST00000518321 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
TVP23C-205ENST00000518321 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
TVP23C-205ENST00000518321 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
TVP23C-205ENST00000518321 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
TVP23C-205ENST00000518321 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
TVP23C-205ENST00000518321 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
TVP23C-205ENST00000518321 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
TVP23C-205ENST00000518321 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
TVP23C-205ENST00000518321 INE1O15225 51 aa2.81□□□□□ -1.96
TVP23C-205ENST00000518321 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
TVP23C-205ENST00000518321 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
TVP23C-205ENST00000518321 PRM1P04553 51 aa2.17□□□□□ -2.06
TVP23C-205ENST00000518321 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
TVP23C-205ENST00000518321 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms