RNA–Protein interactions for RNA: ENST00000518285.1

FAM49B-207, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-207ENST00000518285 ROMO1P60602 79 aa7.1□□□□□ -1.27
FAM49B-207ENST00000518285 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
FAM49B-207ENST00000518285 MT1EP04732 61 aa7.05□□□□□ -1.28
FAM49B-207ENST00000518285 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
FAM49B-207ENST00000518285 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
FAM49B-207ENST00000518285 GPR98Q8WXG9 6306 aa7.02□□□□□ -1.29
FAM49B-207ENST00000518285 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
FAM49B-207ENST00000518285 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.3
FAM49B-207ENST00000518285 KRTAP19-3Q7Z4W3 81 aa6.92□□□□□ -1.3
FAM49B-207ENST00000518285 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
FAM49B-207ENST00000518285 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
FAM49B-207ENST00000518285 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
FAM49B-207ENST00000518285 MT1GP13640 62 aa6.85□□□□□ -1.31
FAM49B-207ENST00000518285 MT1LQ93083 61 aa6.81□□□□□ -1.32
FAM49B-207ENST00000518285 LCE1DQ5T752 114 aa6.73□□□□□ -1.33
FAM49B-207ENST00000518285 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
FAM49B-207ENST00000518285 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
FAM49B-207ENST00000518285 MT1MQ8N339 61 aa6.67□□□□□ -1.34
FAM49B-207ENST00000518285 MT4P47944 62 aa6.63□□□□□ -1.35
FAM49B-207ENST00000518285 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
FAM49B-207ENST00000518285 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
FAM49B-207ENST00000518285 LCE4AQ5TA78 99 aa6.56□□□□□ -1.36
FAM49B-207ENST00000518285 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
FAM49B-207ENST00000518285 KRTAP5-10Q6L8G5 202 aa6.43□□□□□ -1.38
FAM49B-207ENST00000518285 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
FAM49B-207ENST00000518285 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
FAM49B-207ENST00000518285 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
FAM49B-207ENST00000518285 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.39
FAM49B-207ENST00000518285 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
FAM49B-207ENST00000518285 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
FAM49B-207ENST00000518285 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
FAM49B-207ENST00000518285 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
FAM49B-207ENST00000518285 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
FAM49B-207ENST00000518285 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
FAM49B-207ENST00000518285 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
FAM49B-207ENST00000518285 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
FAM49B-207ENST00000518285 KRTAP20-2Q3LI61 65 aa6.06□□□□□ -1.44
FAM49B-207ENST00000518285 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
FAM49B-207ENST00000518285 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
FAM49B-207ENST00000518285 KRTAP12-4P60329 112 aa5.9□□□□□ -1.46
FAM49B-207ENST00000518285 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
FAM49B-207ENST00000518285 MT1AP04731 61 aa5.82□□□□□ -1.48
FAM49B-207ENST00000518285 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
FAM49B-207ENST00000518285 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
FAM49B-207ENST00000518285 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
FAM49B-207ENST00000518285 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
FAM49B-207ENST00000518285 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
FAM49B-207ENST00000518285 H3BS24 57 aa5.48□□□□□ -1.53
FAM49B-207ENST00000518285 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
FAM49B-207ENST00000518285 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
FAM49B-207ENST00000518285 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
FAM49B-207ENST00000518285 MT3P25713 68 aa5.35□□□□□ -1.55
FAM49B-207ENST00000518285 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
FAM49B-207ENST00000518285 AHNAKQ09666 5890 aaKnown RBP5.31□□□□□ -1.56
FAM49B-207ENST00000518285 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
FAM49B-207ENST00000518285 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
FAM49B-207ENST00000518285 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
FAM49B-207ENST00000518285 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
FAM49B-207ENST00000518285 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
FAM49B-207ENST00000518285 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
FAM49B-207ENST00000518285 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
FAM49B-207ENST00000518285 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
FAM49B-207ENST00000518285 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
FAM49B-207ENST00000518285 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
FAM49B-207ENST00000518285 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
FAM49B-207ENST00000518285 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
FAM49B-207ENST00000518285 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
FAM49B-207ENST00000518285 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
FAM49B-207ENST00000518285 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
FAM49B-207ENST00000518285 INE1O15225 51 aa3.9□□□□□ -1.79
FAM49B-207ENST00000518285 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
FAM49B-207ENST00000518285 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
FAM49B-207ENST00000518285 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
FAM49B-207ENST00000518285 PRM1P04553 51 aa3.6□□□□□ -1.83
FAM49B-207ENST00000518285 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
FAM49B-207ENST00000518285 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
FAM49B-207ENST00000518285 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
FAM49B-207ENST00000518285 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 98.8 ms