RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
TOP1MT-203ENST00000517857 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
TOP1MT-203ENST00000517857 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
TOP1MT-203ENST00000517857 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.57
TOP1MT-203ENST00000517857 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
TOP1MT-203ENST00000517857 MT1GP13640 62 aa5.2□□□□□ -1.58
TOP1MT-203ENST00000517857 MT1LQ93083 61 aa5.2□□□□□ -1.58
TOP1MT-203ENST00000517857 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
TOP1MT-203ENST00000517857 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
TOP1MT-203ENST00000517857 MT1MQ8N339 61 aa5.14□□□□□ -1.59
TOP1MT-203ENST00000517857 ROMO1P60602 79 aa5.07□□□□□ -1.6
TOP1MT-203ENST00000517857 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
TOP1MT-203ENST00000517857 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
TOP1MT-203ENST00000517857 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
TOP1MT-203ENST00000517857 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
TOP1MT-203ENST00000517857 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
TOP1MT-203ENST00000517857 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
TOP1MT-203ENST00000517857 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
TOP1MT-203ENST00000517857 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
TOP1MT-203ENST00000517857 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
TOP1MT-203ENST00000517857 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
TOP1MT-203ENST00000517857 MT4P47944 62 aa4.79□□□□□ -1.64
TOP1MT-203ENST00000517857 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
TOP1MT-203ENST00000517857 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
TOP1MT-203ENST00000517857 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
TOP1MT-203ENST00000517857 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
TOP1MT-203ENST00000517857 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
TOP1MT-203ENST00000517857 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
TOP1MT-203ENST00000517857 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
TOP1MT-203ENST00000517857 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
TOP1MT-203ENST00000517857 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
TOP1MT-203ENST00000517857 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
TOP1MT-203ENST00000517857 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
TOP1MT-203ENST00000517857 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
TOP1MT-203ENST00000517857 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
TOP1MT-203ENST00000517857 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
TOP1MT-203ENST00000517857 MT1AP04731 61 aa4.43□□□□□ -1.7
TOP1MT-203ENST00000517857 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.7
TOP1MT-203ENST00000517857 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
TOP1MT-203ENST00000517857 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
TOP1MT-203ENST00000517857 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
TOP1MT-203ENST00000517857 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
TOP1MT-203ENST00000517857 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
TOP1MT-203ENST00000517857 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
TOP1MT-203ENST00000517857 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
TOP1MT-203ENST00000517857 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
TOP1MT-203ENST00000517857 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
TOP1MT-203ENST00000517857 MT3P25713 68 aa4.05□□□□□ -1.76
TOP1MT-203ENST00000517857 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
TOP1MT-203ENST00000517857 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
TOP1MT-203ENST00000517857 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
TOP1MT-203ENST00000517857 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
TOP1MT-203ENST00000517857 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
TOP1MT-203ENST00000517857 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
TOP1MT-203ENST00000517857 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
TOP1MT-203ENST00000517857 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
TOP1MT-203ENST00000517857 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
TOP1MT-203ENST00000517857 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TOP1MT-203ENST00000517857 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
TOP1MT-203ENST00000517857 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
TOP1MT-203ENST00000517857 H3BS24 57 aa3.44□□□□□ -1.86
TOP1MT-203ENST00000517857 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
TOP1MT-203ENST00000517857 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
TOP1MT-203ENST00000517857 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
TOP1MT-203ENST00000517857 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
TOP1MT-203ENST00000517857 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
TOP1MT-203ENST00000517857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
TOP1MT-203ENST00000517857 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
TOP1MT-203ENST00000517857 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
TOP1MT-203ENST00000517857 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
TOP1MT-203ENST00000517857 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
TOP1MT-203ENST00000517857 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
TOP1MT-203ENST00000517857 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
TOP1MT-203ENST00000517857 INE1O15225 51 aa2.62□□□□□ -1.99
TOP1MT-203ENST00000517857 PRM1P04553 51 aa2.61□□□□□ -1.99
TOP1MT-203ENST00000517857 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
TOP1MT-203ENST00000517857 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
TOP1MT-203ENST00000517857 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms